Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01181 ATGATAGCTGCAGCAAGTAAAGCTATATGGGAGAACGGGGCAGCATGTGGAAGAAGGTATAGAGTGAGATGCATTGGTGGGACAAATGCTACTCCAAATCCTTGCAAAGGTGGCAGTGTTGTGGTGAAAGTTATTGATCATTGTCCTCCTGGAGGATGCTACGCCACCATTGATTTATCCCAGGAGGCATTTGCTGCCATTGCTAATCCTGATGCTGGGAAAATTAGGATTCAGTTTGATCGGGTTTGA 249 0.4578 MIAAASKAIWENGAACGRRYRVRCIGGTNATPNPCKGGSVVVKVIDHCPPGGCYATIDLSQEAFAAIANPDAGKIRIQFDRV* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01181 82 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 82 IPR007112 -
Pte10g01181 82 Gene3D - 1 82 IPR036908 -
Pte10g01181 82 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 1 80 IPR044206 GO:0009627|GO:0048046
Pte10g01181 82 CDD DPBB_EG45-like 1 79 - -
Pte10g01181 82 Pfam Lytic transglycolase 3 79 IPR009009 -
Pte10g01181 82 SUPERFAMILY Barwin-like endoglucanases 1 82 IPR036908 -
Pte10g01181 82 SMART dpbb_1 2 79 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01181 Pte-Chr10 29650720 29651092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01181 1 81 Expansin Gene Family AT2G45110 35.870 5.28e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01181 - - jre:109018768 126.331