Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01180 ATGGGTAAGAGGTCGGAAAGGCGGCTGGTGCGGTATGAGAAAGATCAGTCAGGCTGTATGTGGGGTTTGATTAGTATGTTCGATTTCCGTCATGGTCGTTCCACTCAAAAGCTACTTCCAGATAGAAAGCGTGGGAACAGACATGCTGTTGGTACTGTATATTCGAAGAACAAATTTGAGATGCTCAGTAATTTGGATGAAGCTTTTCAAGGAATCCTTGATGCCAACGAGGGTAATGCATCAGTTGTAAAAGGGAGAGTTGATAAGCCCAGTGTGAAAAAACTCATAGAAGAAGAGATGTTCAGTGAACAGCATCTAAAGATGGTAAAAAATAACACTGAAACAGAGCCAAAAGGATCAAGTTTAGGAAATATTGATTCGCTGAAGACTAATGCCAAAAGACCAAAGAGGGCCCGGAGGAAAACCCGTAGTATGGATTCCCATGATCTCAATTCTGATGCAAGCTCTGAATTCTCATTTAACCCTCATTCGAGGCACTCATCTATGAATGATCTTGACTTGAACAAACTCATGGAAGACTTTTGCCACCGCAATCATCTGAAAAGGATTTCGTCTGTCAAGAATGACCAAGGCAGTGAAGTTCTTTCACAAGTGAATCATAAGAATGGTCACATTGAAGACAAAGTTAAAATGGCAATTGAAAATTTCGTGTGTGATACAATTCTTAATGGTAAAGATTCAGAAGCTGGAAAGTTTACTCACATAGAGCTTATTGATGCACTTATCAGTTCGGACAAGGAATTATTAATGAAACTTGGTCAAGACCCGGATTCATTTTTCAGGAAACATTCTCAAGACTTGCTAGTTGCTCAGGAGAACAACCAGGCTGCAGCAAACGAGTCTGCCAAGGACCTTGATAATGCTAAAGAAACTAAGCACAATGTTACTGAGAAGCAGAGAAATATTTTCAGAAAGATCAAGACTCGAGAGAAAATCCAAAGTGATGGAAGTGAAAATGCAGAAGATTCAAACAGAATTGTTATTTTGAAGCCTTTAGCAAAGGGATCGCAAAATCCTAAAACTGAGAGCAGCTTCAGCTCATCACCAATTTCTGGTGAATCCGGCAAAAGCAAAGGTTCTTCTGCAAGATCTAGTTCTCATTTCTCCCTTACAGAAATAAAAAGAAAGCTTAAATATGCAATGGGAAAAGAGAAACATGTATATTCTGTTGGTAAAGATAAGGAAGATGGTGAGAAAGTCAATGGTAAAGATAATGTTGGAAGGAAGCCTCCCAATAAAGATCATTTCTTCCTAGAAAGAATGGCCCGACCTTTAACTGATAATAATAGAAGAGAGAAGATTGGTAAATCAAAAGACTTCGAAATGGGAGTGGAGAAGGGAGCTGAAATCAGTTCCACATCAAGGGTATCTTCTACCTTCTACGCTGAAGCCAAGAAGCACCTTTATGAGATGTTAAGTAATGGAGATGATAGTATTGAATTTTCAGGCCAACAGGTTCCCAAGCCCTTAGGAAGGATCCTATCATTTTCAGATTACAGCTCTTCTCCTATTTGCAGTCCTCGTGGAGACTGGGAGCATGGCTTTGTGACATCCCAGTTGAGAGTTTCTCCTATTGAAAATCTACAGAAGACAAATGATGGTATATCTTCTCCAAAACAAATATCCGACAACTTTGTTGTGGATCTACCAGTCCAGAGCATAGAGTGTGAATCAAACTTGTCTATCGACAGCCATGAAAATAGAATACAAGCTGTTGACATGAAACCAAATCTTTCAGTCAATCCTGTTGATGAAAAGAAGGTGGAAGACACTAGTTCTGTTATTGAAGATGAGGCCATCAGTGGAGGCAAAGTGGAAGTACCAAAGGAGGTTGATACGTTGGATGCTCCATCTGGAACAAGAAGTTTTTCTATTGAGGAAACCAACGATAATTGCGTTGTCTCCTATAATACTGACAATCAAAGACAGTCGGAAAGCTCGAATCAGGATATATTTGAGGACAGCCAACTGTCATCACCTTCACACACCTCATCTACAGTAAAAGTTGAAGAGGTGGAGTGCAGTAATGATGTATCTGGAAAACCAAGTCCTATTTCTGTTCTGGAGCCACCCTTCACAGAGGACGAAGTAAGCCCTAAATACAACAAAAGAGAGCCTGTCGAACCACCTCTTCAACCATTACGAATTCAGTTTGAAGAGTATGAATGTTCTTTGGAAGAGCAAGTTAAGAGTGGCAAACTGTGTATTGAACAAAATAAATTAATACTGGACTATATAAATACAGTTCTTCAAGCCTCCAGCTTGAGCTGGGACAAAATGTGGACAAAATGTCTTACTTGTGACCATATTTTAGATCCATGTTTGTCTGATCAAGTGGTGTACTTCCCAAACCAACTTCATCTTGACCAGAAACTCCTGTTCGACTGTATTAATGAAGTTCTCATGGAGGTTTGCTGCAGTAAAATAGGGGTCTCACCTTGGGTCTGGTTTGTGAATCCCAGCTCAAAGCCTGTTACAAACCTTCAAATGCTTGTACGTGAAGTATGGGAACAAGTGCATTGGCATCTCCTTCCATTGCCTCTACCACATACCTTAGACCAAATTGTAAGGAAAGACATGACAAAAAGTGGAGCATGGGGGGATCGAAGATTTGGTGTTGAAGTTGTAGGGGTTGAAATGAGTGATGCCATTCTCTTGGAATTAATGGAAGACACCATATTTAGCTGCATGTCAGAAAACGTGGAAATTGAAATTCCTTCTTTTGAACTTGAGTTGATGGAAGTCATAGCAGCTCCAATTTGTAAAGATCTTGCTGCACTGACCGATTCTTGTCCAGACCAGAAGCTGATTGCTAACCCCACTGAAGCTGTCAAATCAAGTCCTTGA 2868 0.4027 MGKRSERRLVRYEKDQSGCMWGLISMFDFRHGRSTQKLLPDRKRGNRHAVGTVYSKNKFEMLSNLDEAFQGILDANEGNASVVKGRVDKPSVKKLIEEEMFSEQHLKMVKNNTETEPKGSSLGNIDSLKTNAKRPKRARRKTRSMDSHDLNSDASSEFSFNPHSRHSSMNDLDLNKLMEDFCHRNHLKRISSVKNDQGSEVLSQVNHKNGHIEDKVKMAIENFVCDTILNGKDSEAGKFTHIELIDALISSDKELLMKLGQDPDSFFRKHSQDLLVAQENNQAAANESAKDLDNAKETKHNVTEKQRNIFRKIKTREKIQSDGSENAEDSNRIVILKPLAKGSQNPKTESSFSSSPISGESGKSKGSSARSSSHFSLTEIKRKLKYAMGKEKHVYSVGKDKEDGEKVNGKDNVGRKPPNKDHFFLERMARPLTDNNRREKIGKSKDFEMGVEKGAEISSTSRVSSTFYAEAKKHLYEMLSNGDDSIEFSGQQVPKPLGRILSFSDYSSSPICSPRGDWEHGFVTSQLRVSPIENLQKTNDGISSPKQISDNFVVDLPVQSIECESNLSIDSHENRIQAVDMKPNLSVNPVDEKKVEDTSSVIEDEAISGGKVEVPKEVDTLDAPSGTRSFSIEETNDNCVVSYNTDNQRQSESSNQDIFEDSQLSSPSHTSSTVKVEEVECSNDVSGKPSPISVLEPPFTEDEVSPKYNKREPVEPPLQPLRIQFEEYECSLEEQVKSGKLCIEQNKLILDYINTVLQASSLSWDKMWTKCLTCDHILDPCLSDQVVYFPNQLHLDQKLLFDCINEVLMEVCCSKIGVSPWVWFVNPSSKPVTNLQMLVREVWEQVHWHLLPLPLPHTLDQIVRKDMTKSGAWGDRRFGVEVVGVEMSDAILLELMEDTIFSCMSENVEIEIPSFELELMEVIAAPICKDLAALTDSCPDQKLIANPTEAVKSSP* 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01180 955 MobiDBLite consensus disorder prediction 646 715 - -
Pte10g01180 955 MobiDBLite consensus disorder prediction 401 420 - -
Pte10g01180 955 MobiDBLite consensus disorder prediction 109 166 - -
Pte10g01180 955 MobiDBLite consensus disorder prediction 343 375 - -
Pte10g01180 955 Pfam Domain of unknown function (DUF4378) 751 898 IPR025486 -
Pte10g01180 955 MobiDBLite consensus disorder prediction 290 325 - -
Pte10g01180 955 Coils Coil 285 305 - -
Pte10g01180 955 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 903 - -
Pte10g01180 955 MobiDBLite consensus disorder prediction 281 376 - -
Pte10g01180 955 MobiDBLite consensus disorder prediction 113 128 - -
Pte10g01180 955 MobiDBLite consensus disorder prediction 646 679 - -
Pte10g01180 955 MobiDBLite consensus disorder prediction 151 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01180 Pte-Chr10 29616613 29621861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01180 1 888 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 32.088 5.69e-98 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01180 - - qsa:O6P43_017629 784.637