Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01177 ATGAGAAATCCAAGCTCTCTCAAGCAAGAGTTCTTTAAGAAATGGATACTTGGCCTACGAAAATGTAGGCTTTTCAGAAGGAATATGAATATCGTTGAGAGAAAGAAGGCTATAAAGCTGTCAGCAGACGTAGCCATGGCTTCAGCAAAAACACCAACTACATGTTGGAGTCGTGCTATCATAGCCAACGCATCTAAAGAAGACAACAACAAACTCCTAATGAAGCAAATGCTTGGCTCAGTAAGTTCACCACCTTCACGGATTGACGGAGAATTGCTGAACAATGGCTCACTTATTTCACACAAGAGAGACAGAAGTCAAAAGATGCTGAAAACATGCAGATATGGTAGCGGAATAAAGAGGTTTAAGAGTAAGAAGATCATGGCCACATCTATAGCAAAGAGGGTTGTCCAGAAAAGAACAAAGGTACTTAAGAGTCTTGTTCCAGGAGGAGAGTTCATGGATGATATTTCTCTCATAGAAGAAACCCTAGATTACATTACATCTTTGAAAGCCCAAGTTGATGTTATGAGATGTCTTGCTAGTACCTCTGAGCTCCTGAATCATAAATAA 573 0.3997 MRNPSSLKQEFFKKWILGLRKCRLFRRNMNIVERKKAIKLSADVAMASAKTPTTCWSRAIIANASKEDNNKLLMKQMLGSVSSPPSRIDGELLNNGSLISHKRDRSQKMLKTCRYGSGIKRFKSKKIMATSIAKRVVQKRTKVLKSLVPGGEFMDDISLIEETLDYITSLKAQVDVMRCLASTSELLNHK* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01177 190 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 5 182 IPR044660 GO:0006355
Pte10g01177 190 CDD bHLH_AtIBH1_like 134 181 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01177 Pte-Chr10 29572180 29573463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01177 1 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 44.792 3.86e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01177 - - qsa:O6P43_002930 204.912