Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01153 ATGTTGAAGTACCTGCAAAAGAAAAGGGTTAGAAGCAAGAAGCAGAGAGAGAGACGAAGGAGAAGTGAACCAAAGAAACTGAAAGACGAGGAGAGAAGGGGAGAAGGTCAGGAAGCTTCTGCAAGCCTCGAGAACTTAGGGCAGAGAAAGTGTGCGTCTCGACTCTCAAGGTCTCGAGAAGGAGAAGAGAGACCGAGAGACGAGGCTGAATTGAAAAGGGAGGCAGAAGTGTGCGAGAAGAGTATGGCCAAGTCGAAGAACCACACAGCTCACAACCAATCCTACAAGGCTCATAAGAATGGAATCAAGAAACCCAGAAGACATCGCCACACATCTACCAAAGGGATGGATCCAAAGTTTCTGAGGAATCAAAGGTATGCCAGGAAGCACAACAAAAAGAACGATGAAGCTGCCACTGAGGAAGAGTAA 429 0.4732 MLKYLQKKRVRSKKQRERRRRSEPKKLKDEERRGEGQEASASLENLGQRKCASRLSRSREGEERPRDEAELKREAEVCEKSMAKSKNHTAHNQSYKAHKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHNKKNDEAATEEE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01153 142 MobiDBLite consensus disorder prediction 1 21 - -
Pte10g01153 142 Pfam Ribosomal L29e protein family 84 123 IPR002673 GO:0003735|GO:0005840|GO:0006412
Pte10g01153 142 MobiDBLite consensus disorder prediction 22 38 - -
Pte10g01153 142 Gene3D - 82 142 - -
Pte10g01153 142 MobiDBLite consensus disorder prediction 1 142 - -
Pte10g01153 142 PANTHER 60S RIBOSOMAL PROTEIN L29 82 139 IPR002673 GO:0003735|GO:0005840|GO:0006412
Pte10g01153 142 MobiDBLite consensus disorder prediction 121 142 - -
Pte10g01153 142 MobiDBLite consensus disorder prediction 91 113 - -
Pte10g01153 142 MobiDBLite consensus disorder prediction 53 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01153 Pte-Chr10 29134932 29139000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01153 82 143 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 85.484 3.35e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01153 K02905 - twl:119997923 127.487