Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01146 ATGGCCAAGTCGAAGAACCACACAGCTCACAACCAATCCTACAAGGCTCATAAGAATGGAATCAAGAAACCCAGAAGACATCGCCACACATCTACCAAAGGGATGGATCCAAAGTTTCTGAGGAATCAAAGGTATGCCAGGAAGCACAACAAAAAGAACGATGAAGCTGCCACTGAGGAAGATTTGAGCTTGAGAATATATTGTCATCTTTGGAAGGGACAAGAGACTAGAAGTTACAGGGAAGGAAGAACTTTCCTTCGAATGACAATGATAGAACTTTTCTGGTCTCAGTAG 294 0.4286 MAKSKNHTAHNQSYKAHKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHNKKNDEAATEEDLSLRIYCHLWKGQETRSYREGRTFLRMTMIELFWSQ* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01146 97 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Pte10g01146 97 Gene3D - 1 62 - -
Pte10g01146 97 MobiDBLite consensus disorder prediction 40 59 - -
Pte10g01146 97 MobiDBLite consensus disorder prediction 1 59 - -
Pte10g01146 97 PANTHER 60S RIBOSOMAL PROTEIN L29 1 58 IPR002673 GO:0003735|GO:0005840|GO:0006412
Pte10g01146 97 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01146 Pte-Chr10 28995207 29000068 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01146 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 83.607 7.84e-32 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01146 K02905 - twl:119997923 126.331