Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01144 ATGCACCGCAGCGTCACAGGGCAACTTGCTGGCTCTGAAATTCATGGGTTCCATACATTACAAGAGCTGGATGTTGGCAACATGATGGAAGAAGCTAAAAGCCGGTGGCTTCGCCCCAATGAAATACTTGCTATACTCTGTAATTATAAGTATTTCACCATCAATGCCAAGCCAGTAAACTTGCCAAAAAGTGGAACAATAGTTTTATTTGACCGCAAGATGCTGAGAAACTTCCGTAAGGATGGTCACAACTGGAAGAAAAAAAATGATGGAAAAACTGTGAAAGAAGCCCATGAACACTTAAAAGTTGGTAATGAAGAAAGGATTCATGTTTACTATGCACATGGTCAAGATAATCCAACCTTTGTTCGGAGAAGTTATTGGCTACTTGATAAGAGTCTGGAACATATTGTAATTGTCCACTATCGAGACACACAGGCGTTACATTCACCGGTTGCACAGGTAAATTCAAGTTCTAGTTCTCGCTCTGGTCCAACAGCTCCAGGCTTTACATCGGAAGAATTTGATTCTGACACTGACAATACTCCCTTTTGGGGAGAAAAAGGAACCTTAGAAGTTAATGACAATCTAAGCATCAGAAATTATCACCAGAGGCTTCATGAAATCAATACACTTGAATGGGATGAGCTACTTTCTGCAAATGATCCTAAAAATTCCGTTGCAGTAAGAGGGGGCAAAGTAGATTCATTTGAAACACAGAATCGAATTGTGCTGGATGGCCGTATAAGCAATGTATGGAAATATATGACAATTTCTTGTGAGATCTCTTTTTTTGATGAACTTCTAATGAACTTCTAG 819 0.3968 MHRSVTGQLAGSEIHGFHTLQELDVGNMMEEAKSRWLRPNEILAILCNYKYFTINAKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPTFVRRSYWLLDKSLEHIVIVHYRDTQALHSPVAQVNSSSSSRSGPTAPGFTSEEFDSDTDNTPFWGEKGTLEVNDNLSIRNYHQRLHEINTLEWDELLSANDPKNSVAVRGGKVDSFETQNRIVLDGRISNVWKYMTISCEISFFDELLMNF* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01144 272 SMART CG_1_2 28 146 IPR005559 GO:0003677
Pte10g01144 272 MobiDBLite consensus disorder prediction 151 181 - -
Pte10g01144 272 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
Pte10g01144 272 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Pte10g01144 272 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 24 223 - -
Pte10g01144 272 MobiDBLite consensus disorder prediction 151 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01144 Pte-Chr10 28975448 28978791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01144 6 225 CAMTA Transcription Factor Family AT4G16150 68.018 3.49e-89 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01144 K21596 - jre:108979232 359.762