Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte10g01134 | ATGGTGGATCCAAGTGATAAAGGATCAGAATCGGAGGATGTTACTAGTGGAAACCTAAATGGTACTTCCTCAGAAGAAAGCCATATGGGTGACCAGAAGAAGACATGTGCTGATTGTGGTACCACCAAGACGCCCCTCTGGAGAGGCGGTCCAGCTGGGCCTAAGTCACTATGCAACGCATGTGGGATCAGAAGCAGAAAGAAGAGAAGAGCAGTACTTGGTTTGAACAAAGGGAACTCTGACGATAATAGTCACAGTAATATGAAAAAGAAGAAAGGCAGCAGTAGTGGTAGCAGTAATAAGTTTGGTGATAGCCTTAAGCAGAGATTGCTGGCTTTGGGTAGAGAGGTTTTGATGCAGAGATCTACAGTTGAGAGACAAAGAAAGAAATTGAAGGAAGAAGAACAAGCAGCAGTCTTGTTGATGGCTCTGTCATATGGGTCAGTTTATGCTTAG | 456 | 0.443 | MVDPSDKGSESEDVTSGNLNGTSSEESHMGDQKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRAVLGLNKGNSDDNSHSNMKKKKGSSSGSSNKFGDSLKQRLLALGREVLMQRSTVERQRKKLKEEEQAAVLLMALSYGSVYA* | 152 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte10g01134 | 151 | ProSitePatterns | GATA-type zinc finger domain. | 36 | 61 | IPR000679 | GO:0006355|GO:0043565 | |
Pte10g01134 | 151 | PANTHER | OS01G0976800 PROTEIN | 3 | 151 | - | - | |
Pte10g01134 | 151 | MobiDBLite | consensus disorder prediction | 11 | 26 | - | - | |
Pte10g01134 | 151 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 32 | 70 | - | - | |
Pte10g01134 | 151 | CDD | ZnF_GATA | 35 | 70 | IPR000679 | GO:0006355|GO:0043565 | |
Pte10g01134 | 151 | Gene3D | - | 31 | 101 | IPR013088 | GO:0006355|GO:0008270 | |
Pte10g01134 | 151 | SMART | GATA_3 | 30 | 92 | IPR000679 | GO:0006355|GO:0043565 | |
Pte10g01134 | 151 | MobiDBLite | consensus disorder prediction | 90 | 105 | - | - | |
Pte10g01134 | 151 | MobiDBLite | consensus disorder prediction | 1 | 105 | - | - | |
Pte10g01134 | 151 | ProSiteProfiles | GATA-type zinc finger domain profile. | 30 | 66 | IPR000679 | GO:0006355|GO:0043565 | |
Pte10g01134 | 151 | Pfam | GATA zinc finger | 36 | 70 | IPR000679 | GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte10g01134 | Pte-Chr10 | 28810086 | 28810767 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte10g01134 | 1 | 152 | C2C2-Gata Transcription Factor Family | AT3G06740 | 57.407 | 1.01e-52 | 162 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-GATA | Pte10g01134 | GATA | 4.2e-17 | CL0167 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte10g01134 | - | - | zju:107433211 | 217.238 |