Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01134 ATGGTGGATCCAAGTGATAAAGGATCAGAATCGGAGGATGTTACTAGTGGAAACCTAAATGGTACTTCCTCAGAAGAAAGCCATATGGGTGACCAGAAGAAGACATGTGCTGATTGTGGTACCACCAAGACGCCCCTCTGGAGAGGCGGTCCAGCTGGGCCTAAGTCACTATGCAACGCATGTGGGATCAGAAGCAGAAAGAAGAGAAGAGCAGTACTTGGTTTGAACAAAGGGAACTCTGACGATAATAGTCACAGTAATATGAAAAAGAAGAAAGGCAGCAGTAGTGGTAGCAGTAATAAGTTTGGTGATAGCCTTAAGCAGAGATTGCTGGCTTTGGGTAGAGAGGTTTTGATGCAGAGATCTACAGTTGAGAGACAAAGAAAGAAATTGAAGGAAGAAGAACAAGCAGCAGTCTTGTTGATGGCTCTGTCATATGGGTCAGTTTATGCTTAG 456 0.443 MVDPSDKGSESEDVTSGNLNGTSSEESHMGDQKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRAVLGLNKGNSDDNSHSNMKKKKGSSSGSSNKFGDSLKQRLLALGREVLMQRSTVERQRKKLKEEEQAAVLLMALSYGSVYA* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01134 151 ProSitePatterns GATA-type zinc finger domain. 36 61 IPR000679 GO:0006355|GO:0043565
Pte10g01134 151 PANTHER OS01G0976800 PROTEIN 3 151 - -
Pte10g01134 151 MobiDBLite consensus disorder prediction 11 26 - -
Pte10g01134 151 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 32 70 - -
Pte10g01134 151 CDD ZnF_GATA 35 70 IPR000679 GO:0006355|GO:0043565
Pte10g01134 151 Gene3D - 31 101 IPR013088 GO:0006355|GO:0008270
Pte10g01134 151 SMART GATA_3 30 92 IPR000679 GO:0006355|GO:0043565
Pte10g01134 151 MobiDBLite consensus disorder prediction 90 105 - -
Pte10g01134 151 MobiDBLite consensus disorder prediction 1 105 - -
Pte10g01134 151 ProSiteProfiles GATA-type zinc finger domain profile. 30 66 IPR000679 GO:0006355|GO:0043565
Pte10g01134 151 Pfam GATA zinc finger 36 70 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01134 Pte-Chr10 28810086 28810767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01134 1 152 C2C2-Gata Transcription Factor Family AT3G06740 57.407 1.01e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte10g01134 GATA 4.2e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01134 - - zju:107433211 217.238