Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01128 ATGGGGAGAACCGGGAAAGAATCAGACATCAAATCCCAGTTGGTATCTGAGATTTGCTCCATTTCGACATGCTATGTTGCCTGCATTCATAGGCATGTTGCCAGAAACCGTGTAAAGGCACATTTCATTGATTGGTACCTCATTCTTGGTGTGGACATTGAAGCAGGAGCAGATTTCATTCGAAAGCGATACCATAAACTTGCATTGCAAGTTCATCCAGATAAGAATAATCACCCCAGAGCAGAATTTGCTTTCAAACTTGTGTCTGAGGCATATGCATGTCTCTCAGACAAAGCGAAGAGAAAAGCGTTTGATTCAGAGAGATGCAAGAACTTCTGCTTTGAATGCAACAGAATCCCTTACACAAAAACAAGTTCTTTGGGTGAATCAAACATTACTTCAAATCAAAAGGCAAGGAGTTCAACAAAAAAGACAATTAGTTTTAAACTTTGGAAAGGTCTGAAAGACATAAGAGAAAGATTCAAAGAAGAAACCAGGGTGATAGAGAATTGCGTGAGAACAAATGGAAAAGAATTTCCAATGTCTACTCCAACCAACTTCTTTTTTGGAAGCAAATCTCTGCATAGGATTGAGAGAGAAACTCCGATTTTCAACCCAGCTGATTATGTGTTACAAGGGTATCCTCACTTTAGGGCTCAAGTTTGCAAGGGACCAGCTGACAGGTTTAGTACATTGCTGCAGAGTGAAAGGGTTGGTACTAAGTATGACTCTCCAATTTTTGAAGTTGGATCTGGTAGAAGAATGTTCTCAACCAAATCTGCTTGTGTTGGTTCATAA 798 0.3985 MGRTGKESDIKSQLVSEICSISTCYVACIHRHVARNRVKAHFIDWYLILGVDIEAGADFIRKRYHKLALQVHPDKNNHPRAEFAFKLVSEAYACLSDKAKRKAFDSERCKNFCFECNRIPYTKTSSLGESNITSNQKARSSTKKTISFKLWKGLKDIRERFKEETRVIENCVRTNGKEFPMSTPTNFFFGSKSLHRIERETPIFNPADYVLQGYPHFRAQVCKGPADRFSTLLQSERVGTKYDSPIFEVGSGRRMFSTKSACVGS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01128 265 PRINTS DnaJ domain signature 80 100 IPR001623 -
Pte10g01128 265 PRINTS DnaJ domain signature 64 79 IPR001623 -
Pte10g01128 265 PRINTS DnaJ domain signature 46 64 IPR001623 -
Pte10g01128 265 PANTHER BNAC03G44070D PROTEIN 11 183 - -
Pte10g01128 265 SMART dnaj_3 43 100 IPR001623 -
Pte10g01128 265 ProSiteProfiles dnaJ domain profile. 44 108 IPR001623 -
Pte10g01128 265 Gene3D DnaJ domain 43 169 IPR036869 -
Pte10g01128 265 CDD DnaJ 44 97 IPR001623 -
Pte10g01128 265 ProSitePatterns Nt-dnaJ domain signature. 85 104 IPR018253 -
Pte10g01128 265 SUPERFAMILY Chaperone J-domain 33 108 IPR036869 -
Pte10g01128 265 Pfam DnaJ domain 44 105 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01128 Pte-Chr10 28747976 28749407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01128 26 107 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 37.209 5.72e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01128 - - cave:132184230 290.426