Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01116 ATGAATTCGAATTATGGAAAATCTGGTAACCCCAAAAACTTCGATTTCGATCTTGGGTTGGGGTCAAATCGATCCAGATCTCTCAAAGATCAGAAACAACAAAACCCTTCAGCATATTCTTATGCATCTTCTTCTTCGTATTCTAGTGCACAACCTAGACCATCATGGCAACCCAATAAGCCGTCTTGGACTCATCAGCCAGCGTCGAGCCTGGTGGATGGACCATCTTCAATGGTAGGTGATATTCACGGCAAGAGTTGGGGTTCTGCTGCCTCTTCTTCTACGGGAATTGGAATTGTTAATAAGAACAATCCAAATCTATTTGGTGATTTGGTAACTTCTGCTTTAGGACAAGGTCCCAACAAGGCTCGTGCTAATAGCACTGCTCCTCTGAAACATTCCACGCCAACTTCTTCTAAGGGAGGTCCTTATTCTATGGGAAACGTTGCAGACTCGTTGGCCAAGGGTGGCACAACAGCTAGTGCAGGTAATTGGGGTACTTCATCTTCTTCCGCGAATATGGTTGGTAGTTTTTCAAGTTTTGCTAGTACCGACAACAATACTCGAACGACGAATCTCGGTGGCTCGTCAATGCGAAGTATGGCTGGTGAGAGTGGACCTGGCAGCAAAACCAGTTCGAAAAAAGACCCATTTGGCTCATTGGTTGATTTTAGTGCCAAACAATCTGCAACTCTTAATTCAGCCAGTAAGGCTGGTCAGAACAGTTACCATAATGTCAATAATAGTACAAGAAAAGCTGATGTTTCTTTTGGAGATTTTCAGAGTGCTTCCAACACTAAATCAAATAGTAACGCTTCCACTGGGTCAAAGTCCGCTGCTTTTGACATGGGAGACTTTGGGGGATTTGCAGCCAAGCCTGCTGTGAAGGATGATGATCCTTTACAAGCATCGGGAGGTGATCCCTTTGGCATGTTCTTCTCATCCTCCTCAGCTTCAGTTGGAAGTGCTTCAGCGTCTACTGAAGTGTTTGGAGGGCAGAAATCCTCTGAAATTGATGATTGGGGACTAGATTCTGGGTTTGGCGGGGATGCTGGGCATGATGTTGGTGATGCTACGATTGAGCTTGAAGGGCTTCCACCACCTCCTGCTGGGATAACTGCTTCAGCAGCAAAGTCTAAGGGGTTGGATAATTACAAGAAGGGTCAATTTCCTGATGCCATTAAATGGCTTTCCTGGGCAATCATTCTTTTTGAGAAAATAGGTGATACAGCTGGCTCAGCTGATGTGCTGTCTAGTAGGGCTTCATGTTACAAAGAAGTTGGTGAATACAAAAAGGCAGTCGCAGATTGTACAAAGGTACTTGAACATGATGGTTCCAATGTATCTGTCCTTGTACAGCGTGCTCTCTTGTATGAAAGTATGGAAAAATACAGACTTGGTGCAGAAGACCTGAGGACTGTTCTGAAGATAGATTCTGGTAATAGGATTGCAAGAAGCACAATTCACCGCTTGACAAAGTTGGCTGACTAG 1491 0.446 MNSNYGKSGNPKNFDFDLGLGSNRSRSLKDQKQQNPSAYSYASSSSYSSAQPRPSWQPNKPSWTHQPASSLVDGPSSMVGDIHGKSWGSAASSSTGIGIVNKNNPNLFGDLVTSALGQGPNKARANSTAPLKHSTPTSSKGGPYSMGNVADSLAKGGTTASAGNWGTSSSSANMVGSFSSFASTDNNTRTTNLGGSSMRSMAGESGPGSKTSSKKDPFGSLVDFSAKQSATLNSASKAGQNSYHNVNNSTRKADVSFGDFQSASNTKSNSNASTGSKSAAFDMGDFGGFAAKPAVKDDDPLQASGGDPFGMFFSSSSASVGSASASTEVFGGQKSSEIDDWGLDSGFGGDAGHDVGDATIELEGLPPPPAGITASAAKSKGLDNYKKGQFPDAIKWLSWAIILFEKIGDTAGSADVLSSRASCYKEVGEYKKAVADCTKVLEHDGSNVSVLVQRALLYESMEKYRLGAEDLRTVLKIDSGNRIARSTIHRLTKLAD* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01116 496 PANTHER OS03G0340700 PROTEIN 1 496 - -
Pte10g01116 496 MobiDBLite consensus disorder prediction 1 85 - -
Pte10g01116 496 MobiDBLite consensus disorder prediction 113 146 - -
Pte10g01116 496 MobiDBLite consensus disorder prediction 24 73 - -
Pte10g01116 496 SUPERFAMILY TPR-like 374 487 IPR011990 GO:0005515
Pte10g01116 496 Gene3D Tetratricopeptide repeat domain 372 494 IPR011990 GO:0005515
Pte10g01116 496 MobiDBLite consensus disorder prediction 180 220 - -
Pte10g01116 496 MobiDBLite consensus disorder prediction 119 145 - -
Pte10g01116 496 SMART tpr_5 448 481 IPR019734 GO:0005515
Pte10g01116 496 SMART tpr_5 374 407 IPR019734 GO:0005515
Pte10g01116 496 SMART tpr_5 414 447 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01116 Pte-Chr10 28617893 28619805 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01116 374 491 Calmodulin-binding Proteins AT3G25230 29.134 2.66e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01116 - - qsa:O6P43_021785 525.398