Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01086 ATGTCGAATACAGAATGGCCTTTTTCTGATTATGAACATTATCAAAATATATGTGAGGAGCAGTGCTGTCAGGCTTGCCTGGCTGATTGTTTTTGTGATGTCGCCATATCCAGAAACCTTGAGTGCTGGAAGAAAAAAATCCCCCTCTCCAACGGAAGAATGGATTCTACTGTTGGAGGGAAAGCTCTGATCAAGATAAGGATTGATAATTCTACTTTGACTCATTATTCGAAGAAAGATAGAACAAATGTTTTGATAGCAGGAACGGTTCTATTGAGCAGCTCAGTTTTTCTGAATATCTTGTTCATTGCGGCAGTCTTATTTCTGTTTCAATCAAAGAACAGGAAGTCGAAGATGCTTCGACCATTCCCTTTAATAGAAGGCATGAACATCAGAAGTTTCACTTTCCAAGAGCTAAGACAAGCCACAAATGAATTCAAGGAAGAAGTCGGACGTGGCGCATTTGGAACTGTGTATAAAGGAGCTCTATTTGCTGACGATAACAAGCTGATTGCAGTGAAAAGATTGGAAAACGAGATACAAAGAAGCGAAGTGGAATTCGAAGCTGAAGTCAGTGCCATTGGCAGAACCAACCATAGAAACTTAGTCCAACTCCTTGGATTTTGCAATGAAGGGACACACAGAATACTTGTGTATGAATACATGAGCAATGGCTCCCTTGCAGACTTCCTTTTCAAAGAGCCAAGGCTAAATTGGTACCAGAGGATCGAAATTGCCATGGGGACTGCTAGAGGACTCTTGTACTTGCATGAAGAGTGCAGCAAACAAATAATACACTGTGACATCAAGCCTCAAAATATCCTGCTTGATGATATCCGTACAGCCAAGATTTCGGACTTTGGTTTAGCAAAGCTTTTGAAGACAGACCAGACTAGGACGACAACTGCAATTAGGGGAACAAAAGGTTATGTAGCTCCTGAATGGTTTAGAAGCATGCCGATTACAACTAAGGTTGATGTGTACAGCTTTGGAATATTGTTGCTAGAGCTCGTTTGCTGCAGGAGGAATTTTGAAGGTGAGAGTGAGAGTGAGGATCAGATGATACTGACTGACTGGGCATGTGATTGCTTTAGAGATAGGAAGCTTCATTTGATGGTTAAAGAGGATGAGGAAGCAGTCCATGATATAAAAAAGGTGGAGAGGTTTGTGAAGATTGCTCTCTGGTGCATTCAAGAGGATCCTTCACTGAGACCTACGATGAACAAAGTGACACAGATGCTTGAAGGGGCTGTTGAGGTGCCAATACCCCCAGACCCAACTTCTTACATGAGTTCAGTGTAA 1302 0.4194 MSNTEWPFSDYEHYQNICEEQCCQACLADCFCDVAISRNLECWKKKIPLSNGRMDSTVGGKALIKIRIDNSTLTHYSKKDRTNVLIAGTVLLSSSVFLNILFIAAVLFLFQSKNRKSKMLRPFPLIEGMNIRSFTFQELRQATNEFKEEVGRGAFGTVYKGALFADDNKLIAVKRLENEIQRSEVEFEAEVSAIGRTNHRNLVQLLGFCNEGTHRILVYEYMSNGSLADFLFKEPRLNWYQRIEIAMGTARGLLYLHEECSKQIIHCDIKPQNILLDDIRTAKISDFGLAKLLKTDQTRTTTAIRGTKGYVAPEWFRSMPITTKVDVYSFGILLLELVCCRRNFEGESESEDQMILTDWACDCFRDRKLHLMVKEDEEAVHDIKKVERFVKIALWCIQEDPSLRPTMNKVTQMLEGAVEVPIPPDPTSYMSSV* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01086 433 FunFam S-receptor-like serine/threonine-protein kinase 112 221 - -
Pte10g01086 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Pte10g01086 433 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 222 422 - -
Pte10g01086 433 SMART serkin_6 144 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01086 433 Gene3D Phosphorylase Kinase; domain 1 122 221 - -
Pte10g01086 433 Coils Coil 173 193 - -
Pte10g01086 433 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 426 - -
Pte10g01086 433 SUPERFAMILY Protein kinase-like (PK-like) 127 415 IPR011009 -
Pte10g01086 433 ProSiteProfiles Protein kinase domain profile. 144 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01086 433 Pfam Protein kinase domain 146 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g01086 433 Gene3D Transferase(Phosphotransferase) domain 1 222 420 - -
Pte10g01086 433 ProSitePatterns Protein kinases ATP-binding region signature. 150 174 IPR017441 GO:0005524
Pte10g01086 433 CDD STKc_IRAK 150 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01086 Pte-Chr10 28107794 28109095 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01086 124 416 Receptor kinase-like Gene Family AT1G60800 44.667 6.67e-80 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pte10g01086 Pkinase 7.8e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01086 - - qsa:O6P43_021615 611.683