Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01084 ATGGCTGTGATTTTGCAGCCATGGCTTGTCCTGAGCCTATTCTTTGTTTTTCACAACGTTGTAACCATTTGTAATTGCCAGCCTAATGGTCCTCAGAACATTGAAACTTTCTATCCCACTGCTCCTTCTGATCCTCCGGCACATCAACCGACTCCTCCAATATCACAACCCCAGCTGCCTTCTCCACCACAAGTACGTCCCCCAAGTGGTTCCTCATCAAACACAAGAAGCAAGGTAGCAAAAGCTGTAGCTGCAACAGCAGCTGGAACTCTGGTGCTTTCTGGGATAGCCTTCCTTTTGGTTAGGAGATGCCTCGTTGCAAAGCGCAAGGAAGCGACTGACAGTGGTTCTCCGAGAGATAGACGAGTCATGAGTCACCTGAATGAGTTCGAACGTTACAATGGAAATCTCAAAGGATTTATTGTTGATGAGAATGGTTTGGATGTGGTTTATTGGAAAAACCTTGAAGGCAGAAAGTCCAGGGGATTCAACAAAGAAGTCCGTAATAGTTACAGGAAGAACAAGAGCAAGGAAGCTGTAAAAGAAAAAAATGGTGAAGAAGAAGATGGGAGTAGTAAAAGAAAAGGAAGTCAAAGAAGGAGACGTGAAGTTGTTCAAGAAATTCCTCTGCTTGGTGGGAAGTCTTCATCTTCACATGTATTTATCTCAGAAGAAGATGGTGCAGAAAGGACAACCACGATGAATCATCTTCGTCGTCGTTCTAGTTCATCTGCAATATATGTCAAATATATTGAAAAACCAGTCGCGTCTAGTGCTTCAAGTCCGCCAACACCGCCTTCTCCACCGCCAACACCGCCTTCTCAATCACCAGAGGCTCTTGCTTTTTCAGCAGTTCCTGAACATAAAAGTCCTGGCCCACCTCCCCCTCCGCCAATCTCAGATAGGAAAAGTCCTGAAATACCTACTCCTCCGCTTCCTGCTAACTATGCTTCAGCTCCACCACCGCCCCCTCCTCCTCCTCCAAACAAGGGTCCTAAACCACCACCCCCTCCGACGAATGGGGGTTCCTTAAATTCAACAGCAAAGACACCAGCAGCACCTAAAGAAATGAGGAATGATTCTAAAGATGGGGAGCCTTCTGGGGAAGGAATGACAGGAAATGGAAATGGTCAGGTCAAACTGAAGCCCCTACATTGGGATAAAGTTAACGCTAATACTGATCATTCCATGGTTTGGGACAAAATTGATGGTGGTTCTTTCAGGCAAGAAATTCTTAACTTCCCAGAACGTTTGCTTTTGTTTAATGGAGATCTCATGGAAGCTCTCTTCGGCTATGTTGCCGCAAATAAAAGATCCCAGCAAGCCAAGAAAAACGCGAGTTCAAGCAATTCTAATGCTGTTCAGTCAGCAAAAACTTTCATTCTTGATCCCAGGAAATTGCAGAACACAGCAATTGTCCTAAAATCTCTGACCGCCTCCCGTGAAGAAATTATCGATTCGCTGAAAGAGGGAGAAGGTCTCAGTGCCGATACTATCGAAAAACTAGCTAGAATTGCTCCAACAGAAGAAGAGCAATCCCTTATCCTTGATTACAAAGGAGACCTATCAAAACTTGCAGATGCTGAAGTATTCCTTCACCAAATATGTATAGCTGTTCCTAGGGCTTTCAAACGTTTGGATGCTATGCTCTTCAGAATGAATTTTGATTTAGAGGTTCTGCAACTGAATGAATCTTTACAAATTCTTGAGCTCGGCTGCAAGGAGCTTCGAACAAGGGGGCTATTCATGAAACTTCTTGAAGCAATTCTAAAGGCCGGTAATCGAATGAATGCCGGTACTTCACGAGGGAATGCTCAAGCATTCAACCTCACTGCTCTAAGGAAGCTTTCTGACGTTAAAAGCATGGATGGAAAAACTACCTTACTTCATTTTGTGGTTGAAGAAGTAGTCCGTTCTGAAGGGAAACGTTGCGCAATCAACCATAATCACGGCTTGAATCGTAACAACAGTTTGAGCGGCAAAAGCTACTTGAATGTTGATCAGAGCTTAGCCTCAGAAGAAGAAACGGATAGAGAATATGTCAGGCTAGGATTGGCTATTGTTGGAGGACTTAGTGCTGAGTTCTCGAACGTTAAGAAATCAGCTGCCATTGATTATGATAGTTTCAGCGGCACAGTCTTGGCTCTCGGTTCCAGTATGTCTCGAATTAGATGTGTCGTGATTGAATGTGATGATGGTGGAGGGGGAAGATTTGTAAGAGAAACGAAAATTTTTCTTGAAAATGCAAAACGACAACTGGAGATGGTGAATGAAGATCAAGCAAAGGTGATTGAACTTGTTAGAAGGACAACGGCATACTATCAACCAGGATCTTCAAGAAATAGAGAAGCTAATCCACTGCAAATATTTGGGATAGTCAAGGAATTCCTTGGAATGGTAGACCAAACATGTATTGAGATTGCGCGTAATATGCAGAAGAGGAAGACATCATTGGCGTCATCATCACCTCAAGCGCCAGCAGCAAGGGGACCAGTCAAGTTTCCGAACCTGCGGGGACGTTTTATGTTAGATAATTCTGAATGCTCGACAAGCGACTCAAATGGTGCTTCTTAA 2574 0.4394 MAVILQPWLVLSLFFVFHNVVTICNCQPNGPQNIETFYPTAPSDPPAHQPTPPISQPQLPSPPQVRPPSGSSSNTRSKVAKAVAATAAGTLVLSGIAFLLVRRCLVAKRKEATDSGSPRDRRVMSHLNEFERYNGNLKGFIVDENGLDVVYWKNLEGRKSRGFNKEVRNSYRKNKSKEAVKEKNGEEEDGSSKRKGSQRRRREVVQEIPLLGGKSSSSHVFISEEDGAERTTTMNHLRRRSSSSAIYVKYIEKPVASSASSPPTPPSPPPTPPSQSPEALAFSAVPEHKSPGPPPPPPISDRKSPEIPTPPLPANYASAPPPPPPPPPNKGPKPPPPPTNGGSLNSTAKTPAAPKEMRNDSKDGEPSGEGMTGNGNGQVKLKPLHWDKVNANTDHSMVWDKIDGGSFRQEILNFPERLLLFNGDLMEALFGYVAANKRSQQAKKNASSSNSNAVQSAKTFILDPRKLQNTAIVLKSLTASREEIIDSLKEGEGLSADTIEKLARIAPTEEEQSLILDYKGDLSKLADAEVFLHQICIAVPRAFKRLDAMLFRMNFDLEVLQLNESLQILELGCKELRTRGLFMKLLEAILKAGNRMNAGTSRGNAQAFNLTALRKLSDVKSMDGKTTLLHFVVEEVVRSEGKRCAINHNHGLNRNNSLSGKSYLNVDQSLASEEETDREYVRLGLAIVGGLSAEFSNVKKSAAIDYDSFSGTVLALGSSMSRIRCVVIECDDGGGGRFVRETKIFLENAKRQLEMVNEDQAKVIELVRRTTAYYQPGSSRNREANPLQIFGIVKEFLGMVDQTCIEIARNMQKRKTSLASSSPQAPAARGPVKFPNLRGRFMLDNSECSTSDSNGAS* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01084 857 MobiDBLite consensus disorder prediction 166 207 - -
Pte10g01084 857 MobiDBLite consensus disorder prediction 35 77 - -
Pte10g01084 857 MobiDBLite consensus disorder prediction 259 276 - -
Pte10g01084 857 Gene3D Formin, FH2 domain 382 828 IPR042201 -
Pte10g01084 857 ProSiteProfiles Formin homology-2 (FH2) domain profile. 371 826 IPR015425 -
Pte10g01084 857 Pfam Formin Homology 2 Domain 378 800 IPR015425 -
Pte10g01084 857 MobiDBLite consensus disorder prediction 43 67 - -
Pte10g01084 857 MobiDBLite consensus disorder prediction 255 381 - -
Pte10g01084 857 MobiDBLite consensus disorder prediction 288 341 - -
Pte10g01084 857 PANTHER FORMIN-RELATED 47 827 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pte10g01084 857 SMART it6_source 371 815 IPR015425 -
Pte10g01084 857 MobiDBLite consensus disorder prediction 166 240 - -
Pte10g01084 857 MobiDBLite consensus disorder prediction 816 837 - -
Pte10g01084 857 Coils Coil 746 766 - -
Pte10g01084 857 SUPERFAMILY Formin homology 2 domain (FH2 domain) 384 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01084 Pte-Chr10 27928253 27930921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01084 378 842 FH2 protein (formin) Gene Family AT1G59910 52.510 2.00e-142 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01084 - - qsa:O6P43_033101 763.837