Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01082 ATGGATGGAGTAGTTTCTGAAGGATGGAGCTTTAAGGAAGTGGGAAAATTTCCGGTTTCACAGTTTGAGTCTGAAGAGGTTCATGTTTTGGCGGTTGATGACAGCCTAATCGATCGGAAAGTCATAGAGCATTTGCTCAAGGTTTCATCATGCAAAGTGACGGCTGTGGACAGTGGAAAGAGCGCCCTGCAGTTCCTTGGTTTGAATGGAGAGGAAAAATCATCCGTTTACTTTGATTTAAAAGTGGATTTGATCATCACTGACTACTGTATGCCGGAAATGACTGGTTTTGAATTGCTGAAGAAGATCAAGGGGTCTTCTACTTTCAGAGAAATCCCAGTGGTGATTATGTCCTCTGAGAACGTTTTGACACGCATTGACAGGTGCCTGGAAGAAGGAGCAGAAGATTTCATAGTGAAACCAGTGAAGCTATCCGATGTGAAGCGGTTATTGAATTATTATATGATGAGAGAAATCAGAAGGACTGCAAGTGAAGAAACTGACGATGATACAGAGAGACAAGGTGGAGTAGATGGTGGAGAAGGAATAGGCAGAGGTTTTTGCAAAAAGAGAAAGCTAAGAGAAAGTGATTTCTCTTCATCAACCCAATCCATTTTATCATCAACTGCTTCATCATCTCTATCCATATCACCGGTGTCATCATCTTCGCCACAAGATTCTCCACCGGATCACCATTAA 699 0.422 MDGVVSEGWSFKEVGKFPVSQFESEEVHVLAVDDSLIDRKVIEHLLKVSSCKVTAVDSGKSALQFLGLNGEEKSSVYFDLKVDLIITDYCMPEMTGFELLKKIKGSSTFREIPVVIMSSENVLTRIDRCLEEGAEDFIVKPVKLSDVKRLLNYYMMREIRRTASEETDDDTERQGGVDGGEGIGRGFCKKRKLRESDFSSSTQSILSSTASSSLSISPVSSSSPQDSPPDHH* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01082 232 Pfam Response regulator receiver domain 29 149 IPR001789 GO:0000160
Pte10g01082 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 27 199 IPR045279 GO:0009736
Pte10g01082 232 ProSiteProfiles Response regulatory domain profile. 28 155 IPR001789 GO:0000160
Pte10g01082 232 SUPERFAMILY CheY-like 27 156 IPR011006 -
Pte10g01082 232 Gene3D - 27 197 - -
Pte10g01082 232 MobiDBLite consensus disorder prediction 198 226 - -
Pte10g01082 232 MobiDBLite consensus disorder prediction 163 232 - -
Pte10g01082 232 CDD REC_typeA_ARR 29 150 - -
Pte10g01082 232 SMART REC_2 27 151 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01082 Pte-Chr10 27923689 27925266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01082 14 154 Response Regulator Gene Family AT1G10470 70.213 2.85e-66 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte10g01082 Response_reg 1.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01082 K14492 - cpap:110822792 223.787