Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01081 ATGGCGCAGCCCCCTATAGAATCTGTACAATGCTTCGGTCGCAAGAAGACTGCTGTGGCAGTCGCCTACTGCAAGAAGGGTCGCGGCTTGATCAAGATCAATGGCCGTCCTATCGAGCTGGTCGAACCTGACAGCCTCCGTTTCAAGGCCTGTGAACCCATCCTTCTTCTGGGCCGTCACCGTTTTGCTGGCGTTGACATGAGGATCAGAGTTAAGGGTGGAGGGAAAACCTCTCAGATATATGCCATCCGTCAGAGCATTGCTAAGGCTTTGGTTGCTTTCTACCAGAAATATGTGGATGAGCAAAGCAAGAAGGAGATTAAGGATATTCTCGTCAGGTACGATAGGACTTTGCTTGTTGCTGATCCCAGGCGCTGCGAGCCTAAGAAGTTCGGTGGTCGCGGTGCCAGAGCCAGGTTCCAGAAGTCTTACCGTTGA 438 0.5205 MAQPPIESVQCFGRKKTAVAVAYCKKGRGLIKINGRPIELVEPDSLRFKACEPILLLGRHRFAGVDMRIRVKGGGKTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01081 145 ProSitePatterns Ribosomal protein S9 signature. 73 91 IPR020574 GO:0003735|GO:0005840|GO:0006412
Pte10g01081 145 Gene3D - 2 145 IPR014721 -
Pte10g01081 145 PANTHER RIBOSOMAL PROTEIN S9 7 142 IPR000754 GO:0003735|GO:0005840|GO:0006412
Pte10g01081 145 FunFam 40S ribosomal protein S16 1 145 - -
Pte10g01081 145 SUPERFAMILY Ribosomal protein S5 domain 2-like 8 145 IPR020568 -
Pte10g01081 145 Pfam Ribosomal protein S9/S16 13 145 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01081 Pte-Chr10 27875069 27876199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01081 2 146 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 84.138 6.59e-88 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01081 K02960 - mnt:21410120 270.011