Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01046 ATGGGTGCATGTGCACGTGGTGATCCTGCACTTCGGCGTCCTGGAAGATTTGATCGGGAGATATATTTTCCACTGCCCTCGGTGGAGGACAGAGCTGCTATTCTCTCACTTCACACACAGAAATGGCCGAAACCAATTGATGGCCCTTTGCTCGAGTGGATTGCTATGAGAACTGCTGGATATGCTGGTGCTGATCTTCAGGCTCACTGTACGCAAGCAGCGATCACTGCGTTGAAGAGGAATTTCCGTTTGCATGAAGTACTTTCTTCTGCGGTAGATAATGTTGATAAGCAGCTTCCTCTTCCAAAATTTTCTGTGGAGGAGAGGGATTGGTTGCAGGCTATATTAATGTTTGTTGGAACTGATACTGCCACCTGTTTGCTTGAACGAGTGTGTTGCAGAACTGCATTTGTTGCACTTCATGTTCTTGTCAGAAACGAAGCACCGATGCTTGGAAGCCTTGACCCAAATAATCCTGAACTAGAGGAACCGTTGACTTTGTCTTCCTTAGCAGGACTACCATCAGAAATCTTTGGATGGCAAGAGAAAGAGATAGACAAACTGATGTTACCCCGAGCTTTAAATCTCTAA 591 0.4585 MGACARGDPALRRPGRFDREIYFPLPSVEDRAAILSLHTQKWPKPIDGPLLEWIAMRTAGYAGADLQAHCTQAAITALKRNFRLHEVLSSAVDNVDKQLPLPKFSVEERDWLQAILMFVGTDTATCLLERVCCRTAFVALHVLVRNEAPMLGSLDPNNPELEEPLTLSSLAGLPSEIFGWQEKEIDKLMLPRALNL* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01046 196 Pfam AAA+ lid domain 51 83 IPR041569 -
Pte10g01046 196 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 26 116 - -
Pte10g01046 196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 82 IPR027417 -
Pte10g01046 196 Gene3D - 8 25 IPR027417 -
Pte10g01046 196 Gene3D - 26 83 - -
Pte10g01046 196 PANTHER AAA DOMAIN-CONTAINING 8 115 IPR045199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01046 Pte-Chr10 27316844 27318478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01046 8 87 Calmodulin-binding Proteins AT3G56690 46.250 1.54e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01046 - - csv:101208571 177.178