Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01022 ATGGGTACTATTAGTGGCAATTGGGGTTGTAATAATGAGGAATTTTCAGACATTAAAGAGAAAGGAGAAATTGGTTTCCTAGACACTGAGGTCGGCAAATTGGTTGGTGCTTACGTCAATAACGAGGACGATCCAGTTGCGATATCATTTCCATTTAGTCATGTGAATGGGATGCCTCCCTCTGTATTTGTTGGAGAAACTGCTACTGACTCAATCACTATAAAGAATGCCACACGTGAACCAGTTGAACTGTGGGGTGTCAATATTTTCGCTTCAAGTCCTGAGGATTCTTTCACTCTATCAGTTGTGGAGCCTCCATCAAAGCCAAGCATAGATGCAGTCGGAGGCTTCTCGGAGTCTTTTTCCTTGGAAGACAGAATACTTCAGCCAGGCGAGACTTTGACTATCTGGTTGTCTTGCAAACCAACAGAAATAGGCTTGCATGTGACAGCTGTTCAGTTTGATATAGATGATGAAAGAATAGAAAGGGTGGCATCTCTCTTGGCCGATGATAAGATTTCCCGGACTCTTACTTCTAGTAGGCGATTTTCCAAAAGGAAGAAAAAAGAGAAATTTGTTGTTGAAAATTACGTTGCAGCTACACCTCCTGTGAAACCGAGAAAACGAGGTAATAGAAATAGGCTTCGTCCACATGACATTCCGAAGAATGTCAGAAAATTGCTTGAGAATGGGCAGATTCCTGATTCTGTCCAAGAAGGTCTTACTAAACAGAATTATGCTTCATTTTTCAAAACACTGCTGATGGTGGAAGAAATAAAAATGGAGGAAGAAATGAGAAGTTATGACATGGAATACGTTACTATGAGAAAGACGGGAAATCACTTCTTGGCCCTTCAGGTTCCAGGGCTTGCTGAGCGAAGGCCATCACTTGTTCATGGAGACTCTATTTTCGCGAAGCAAGCATCTCAAAAGGCACGCAACGAAACTCAACCCCACCAGCCACAATTTATTCAGGGATATGTTCACGGTGTGGAAGCAGATGAAGTCTATTTGAAGTTTGCGGAAGAATTTCACTTGCAGCACAGAAAGGGAAATCTCTATAATGTTCACTTTACATATAATCGAACTAATATGAGAAGGTTGTATCAGGCCATGGATGCTATAAGGAATTTATCACGAAGTTTTCTATTTCCTTCGGAGTATTCCAAGAGGAGGTTCATCAAAAGCACTGCTTTTTTGCCTATATCTGAAAATCTGAACAGTGAACAAATGTATGCTATCCAAAAAATTCTCAGCTGCAAAGGAGCACCCCCTTATGTGATCCAGGGACCTCCTGGTACTGGGAAGACCATGACGGTAGTGGAAGCAATCATTCAGTTATACACTAGAGATAAGAATGTGCGGATTCTTGTATGTGCACCCTCCAATAGTGCAGCAGACCTTGTACTAGAGAAATTTCTTAACAAGAATCCTATTGGATTGAGCGAAAGTGAAGTATTCAGGCTAAATGCATCCACCCGTTCTTATGAGGATGTCAGGCCTCAACTCTTGCGGTTCTGCTGTTTTAATAATTTTGTCTTCAAGTGTCCTCCTGTCAATACTCTTGTACATTACAGGATCGTGATATCAACTTTTATGGGTTCATCTCTTCTTTCAGCTGAAGGTATTAAAAAGGGTCACTTCACCCATATTTTCTTGGATGAGGCTGGCCAAGCATCTGAACCGGAAACCCTCATTCCTATATCCAACCTGTGCAAAAAGAAAACAGTAGTTGTTCTTGCTGGAGATCCTATGCAGTTAGGTCCAGTAATATATTCCCAGGAAGCAGCGTCTTATGGATTAGGAAAATCTTACTTGGAAAGACTGCTTGAATGTCAATTTTACACCAATGGTGATGAAAATTATGTTACTAAACTTGTAAGAAATTATCGATCTCATCGGGAAATTCTTTATCTGCCCTCATTGCTCTTCTATGGGGGAGAACTCATACCATGCCAAGATGAAGGGAGGAACTTGAATGAGAAGATTGACCTACTTCCTAACAAGGAGTTCCCTGTTCTTTTCTTTGGTATCCAAGGATGTGATGAGAGGGAAGGAAATAATCCCTCATGGTTTAATCGAATTGAAGCAAGCAAGGTCATTGAGGTTGTCAAAAGACTGACAGCAGATGGAAAAATTGGGGAGGAAGACATTGGAATTATAACACCATATAGGCAACAGGTGATCAAACTCAAAAAGGCATTTGAGTCTATGGAGATGCTTAATATAAAGATTGGCAGTGTAGAGCAATTTCAAGGACAAGAAAGACAAGTTATAATTATATCTACTGTCCGTTCGACCATCAAACACAATGAATTTGACAAGGCCCATTGCTTGGGTTTTTTGAGCAATAAACGAAGGTTTAATGTGGCCCTCACTCGTGCTATTTCTTTGCTGATTATTATAGGGAATCCACATATTATTCACAAGGACTCTAACTGGAACAAGCTATTGTGGCGTTGTGTAGACAACTCATCTTATATGGGTTGTTCTCTGCCTGAAAGAAGGGACATTCATGATGATGATGATGATGATGATACCGCCACACTGGACTCTGACTTGAATCACGAACAAGGAACTGCTTTAATTAGCCTCTGA 2598 0.408 MGTISGNWGCNNEEFSDIKEKGEIGFLDTEVGKLVGAYVNNEDDPVAISFPFSHVNGMPPSVFVGETATDSITIKNATREPVELWGVNIFASSPEDSFTLSVVEPPSKPSIDAVGGFSESFSLEDRILQPGETLTIWLSCKPTEIGLHVTAVQFDIDDERIERVASLLADDKISRTLTSSRRFSKRKKKEKFVVENYVAATPPVKPRKRGNRNRLRPHDIPKNVRKLLENGQIPDSVQEGLTKQNYASFFKTLLMVEEIKMEEEMRSYDMEYVTMRKTGNHFLALQVPGLAERRPSLVHGDSIFAKQASQKARNETQPHQPQFIQGYVHGVEADEVYLKFAEEFHLQHRKGNLYNVHFTYNRTNMRRLYQAMDAIRNLSRSFLFPSEYSKRRFIKSTAFLPISENLNSEQMYAIQKILSCKGAPPYVIQGPPGTGKTMTVVEAIIQLYTRDKNVRILVCAPSNSAADLVLEKFLNKNPIGLSESEVFRLNASTRSYEDVRPQLLRFCCFNNFVFKCPPVNTLVHYRIVISTFMGSSLLSAEGIKKGHFTHIFLDEAGQASEPETLIPISNLCKKKTVVVLAGDPMQLGPVIYSQEAASYGLGKSYLERLLECQFYTNGDENYVTKLVRNYRSHREILYLPSLLFYGGELIPCQDEGRNLNEKIDLLPNKEFPVLFFGIQGCDEREGNNPSWFNRIEASKVIEVVKRLTADGKIGEEDIGIITPYRQQVIKLKKAFESMEMLNIKIGSVEQFQGQERQVIIISTVRSTIKHNEFDKAHCLGFLSNKRRFNVALTRAISLLIIIGNPHIIHKDSNWNKLLWRCVDNSSYMGCSLPERRDIHDDDDDDDTATLDSDLNHEQGTALISL* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01022 865 CDD SF1_C_Upf1 632 821 IPR047187 -
Pte10g01022 865 FunFam Probable RNA helicase SDE3 355 500 - -
Pte10g01022 865 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 403 818 IPR027417 -
Pte10g01022 865 FunFam Probable RNA helicase SDE3 517 617 - -
Pte10g01022 865 Pfam AAA domain 405 499 IPR041677 GO:0004386
Pte10g01022 865 Pfam AAA domain 524 593 IPR041677 GO:0004386
Pte10g01022 865 Pfam AAA domain 602 805 IPR041679 -
Pte10g01022 865 Gene3D - 330 617 IPR027417 -
Pte10g01022 865 Gene3D - 631 835 IPR027417 -
Pte10g01022 865 CDD DEXXQc_Helz-like 406 631 IPR026122 GO:0003723|GO:0032574
Pte10g01022 865 PANTHER CANCER/TESTIS ANTIGEN 55 124 387 - -
Pte10g01022 865 FunFam Probable RNA helicase SDE3 631 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01022 Pte-Chr10 26827779 26832643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01022 396 562 Core DNA Replication Machinery Family AT1G08840 29.412 3.21e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01022 K18422 - qsa:O6P43_021547 1117.45