Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01019 ATGGACACCCCAGATAGGAACCAGATCGGGACACCCCTTTCCAAATTCGAGGACTCCCCTGTCTTCAGCTATATCAGCAGTCTTTCTCCTATCAAACCGCTTAAGTCTCTGCACGTCACTCAGACTTTCAATTCACTTAGCTTTTCATCCCCTCCTTCGGTTTTTACATCACCTCATGTTACCTGTCACAGAGAGTCAAGATTCCTCAGAAGCCACAATATTACAGATCTATCAAATCCTAAAGAGAACAAAGTCCCCACAAAAGATGCTGTTACAGAAGCGACCAATGTGTATAGCAATGGAAATGGAGAGCAGAAAAATATTGACCAAGGTGTTTTGATTGGAGATGATTCTATTGAGCAATCCAAAGAAGATACCAATTTCCCAATCGAGCTGCCAAACAAACTAAAGTACAACTGTTGCAGCCCTGAGTATGAACCCACAGCTTGTTCAGGCAATGAGACTAGTTCTATATTGGAATTGCCTAAAAACTCAGAATCATTGGCTGTATCAGCTCAACAAGCTGAAAGAGATCTATCTGAGAACGAATTACAAGTGGTGGAAATATCAGAATTTTGTTGTGTTGAGCTAAAACCAGAAGGCAGCGAATCTGATTTGGACAGTTTAATTGCAGATGCTTCTGAGCTGTTAATTTTTAACTCTCAAAATGATACAGAAGCTTTCAAGGGTCTCATCGACAGACCCTTAGATTCGGCTGCAACATCTTGCAATGTTGTATCACAGTTAGAACAGAATAACATTGACAATGTCGAGAAGCTTCATGTCACAGATCAGATTACTTCATCAGAGCTTGAAACTGATTACAATTCTTCTAATCCTGTAGCATCATTTAAGCAGGTAGAATGTCATCGTAGGCACCAGAAAAAGGACTATGCTGTGGCTACAATGGATTCCAATCCAAGTGGGAAAATGAATAATGAGTCTGGTTTTACCAATCAACGTGGGCTGCGAAGGCGCTGTCTAGATTTTGAGATAACTTGCCGCCGCAAAATGTCAGCTAATGGTTCAAGTAGCAATTCTTGCATATGTCCATCTGATGAGAAGAACGATAAGCAAATAGTCCCTTTAAAACTAAGTGCGGATTCACAAAGGTGTATTGTTCCTGGAATTGGATTGCACTTGAATGCACTTGCAAAAACCTTGAAAGATTGTGGAGGCACCAAGCATGAAAATTTGCAAGTATCAAACTCTTCCATACAACCACCTGCGAGTCAGGAGCATTCTCTTTCAGTTTTGGCATCTTCTGGAAGATACATAGATCCTTATGACAATGAAACTCGACTTGCAGAAGATGGTTCCCAGCTGCATGAATATTTGGTCACTGAAGATTCCAATCAGGGCAGCCCGAAAAAGAAAAGACGCAAGTTAGAAACTGGTGCAGACAATGAGGGCTGTAAACGATGTAATTGCAAGAAATCCAAGTGTTTAAAGCTCTACTGTGAGTGCTTTGCTGCTGGTGTTTACTGCATAGACTCTTGTACTTGTCAAGATTGCTTCAACAAGCCTATTCATGAAGATACAGTTCTGGAAACTCGCAAGCAGATTGAGAGTCGCAACCCTCTTGCGTTTGCTCCAAAAGTAATTAGGAGCTCTGATACCATTCCTGAAGTTGGGGATGAATCAAACAATACCCCGGCCTCAGCTAGACACAAAAGGGGATGCAACTGCAAGAAATCTAATTGCTTAAAGAAATACTGTGAATGCTATCAGGGAGGTGTCGGATGCTCTATTAACTGCAGATGCGAAGGGTGCAAGAATAAATTTGGTAGAAAGGATGGTTATGTTCCTCTCACCATTGAAGCTGAAGCAGAAGAAACGGAAACTTGTGAACAGAGTACAGCCGATAAAGGCCTAAAAGTTACTACAGATATGCAGAATAATGAGCATATGGATTCTACTCTTACTCTTATAACGACACCTTCACAGCTTTGCAGATCACTGGTTCCTCTGTCCTTTTCATCTAGAGGCAACGGGAAACCACCGAGATCTTGTTTTGTTACTGGAGGATTGTATGGCAGCCATAAACTGGAGAAACCAAGTGTGAAACTTGAAAAGCAAATGCAAGTTGTCCCAGACGATGAAGTGCCAGAGATTCTGAGAGGAGATGATGGCTCCTCGGTCAACTGCATGAAAACCTCTCCGAACAGCAAGAGAGTGTCCTCTCCTCACTGCAACTATGTAGCATCTCCTACTCGGAGGAGTGGAAGAAAATTGATATTACAATCAATTCCATCCTTCCCTTCTCTTACTCCTCACCATTAG 2283 0.4192 MDTPDRNQIGTPLSKFEDSPVFSYISSLSPIKPLKSLHVTQTFNSLSFSSPPSVFTSPHVTCHRESRFLRSHNITDLSNPKENKVPTKDAVTEATNVYSNGNGEQKNIDQGVLIGDDSIEQSKEDTNFPIELPNKLKYNCCSPEYEPTACSGNETSSILELPKNSESLAVSAQQAERDLSENELQVVEISEFCCVELKPEGSESDLDSLIADASELLIFNSQNDTEAFKGLIDRPLDSAATSCNVVSQLEQNNIDNVEKLHVTDQITSSELETDYNSSNPVASFKQVECHRRHQKKDYAVATMDSNPSGKMNNESGFTNQRGLRRRCLDFEITCRRKMSANGSSSNSCICPSDEKNDKQIVPLKLSADSQRCIVPGIGLHLNALAKTLKDCGGTKHENLQVSNSSIQPPASQEHSLSVLASSGRYIDPYDNETRLAEDGSQLHEYLVTEDSNQGSPKKKRRKLETGADNEGCKRCNCKKSKCLKLYCECFAAGVYCIDSCTCQDCFNKPIHEDTVLETRKQIESRNPLAFAPKVIRSSDTIPEVGDESNNTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSINCRCEGCKNKFGRKDGYVPLTIEAEAEETETCEQSTADKGLKVTTDMQNNEHMDSTLTLITTPSQLCRSLVPLSFSSRGNGKPPRSCFVTGGLYGSHKLEKPSVKLEKQMQVVPDDEVPEILRGDDGSSVNCMKTSPNSKRVSSPHCNYVASPTRRSGRKLILQSIPSFPSLTPHH* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01019 760 MobiDBLite consensus disorder prediction 713 730 - -
Pte10g01019 760 MobiDBLite consensus disorder prediction 703 730 - -
Pte10g01019 760 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 759 IPR044522 GO:0003700
Pte10g01019 760 SMART CXC_2 470 511 IPR033467 -
Pte10g01019 760 SMART CXC_2 556 597 IPR033467 -
Pte10g01019 760 ProSiteProfiles CRC domain profile. 471 596 IPR005172 -
Pte10g01019 760 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 473 508 IPR005172 -
Pte10g01019 760 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 559 594 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01019 Pte-Chr10 26792396 26797011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01019 16 761 CPP Transcription Factor Family AT4G14770 42.188 1.71e-148 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pte10g01019 TCR 2.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01019 - - qsa:O6P43_003327 812.372