Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte10g01018 | ATGGTGCGAAAGTGGCAAACTTTAATTGAAGCCCATGTGGATGTTAAGGCTACAGACAATTACACGCTCAGGATGTTTGCATTGGGTTCACTTAGAGGCGTAGTAAGCAGGTCAAGAGAGTACATGCCATGCACAATCGAGCTAGATTAG | 150 | 0.4467 | MVRKWQTLIEAHVDVKATDNYTLRMFALGSLRGVVSRSREYMPCTIELD* | 50 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte10g01018 | 49 | Pfam | Ribosomal S3Ae family | 1 | 30 | IPR001593 | GO:0003735|GO:0005840|GO:0006412 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte10g01018 | Pte-Chr10 | 26790711 | 26791888 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte10g01018 | 1 | 29 | Cytoplasmic Ribosomal Protein Gene Family | AT4G34670 | 75.862 | 6.84e-11 | 52.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte10g01018 | K02984 | - | nnu:104608472 | 58.5362 |