Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01009 ATGAATACACAAGCAAGAGCTAAGAAGGAATTTCAAGAGGCCAGTTCTTCCTTTTCCGAAGGTCAGCCAGTACTTGCTCCTCAACCTATGGAGGGACTTCATGAAACGGGTCCTCCGCCATTTCTTAACAAAACTTATGACATAGTCGAGGATCCTTCAACAAATCATGTAGTATCTTGGAGCAGAGGGAACAACAGCTTTATTGTATGGGATCCCCAAGCCTTTTCCACGAGTCTTCTTCCCAGATACTTCAAGCATAACAATTTCTCCAGCTTTGTCAGGCAGCTTAATACATACGGCTTTAGAAAGGTTGATCCAGATAGGTGGGAGTTTGCTAATGAAGGGTTTCTGAGAGGACAGAAGCATCTTTTGAAGACAATCAGGAGAAGAAAGACACATCAAACTCAAGCTTCACAGCACTCTTTAGATCCATGTGTTGAAGTGGGACGGTTTGGCTTAGATGGAGAAGTTGACAGGTTGACGCGTGACAAACAGGTTTTAATGGTGGAGCTTGTAAAGCTTAAACAGCAACAGCAGAATACCAGAAGCTATCTCCAAGCAATGGAAGATAGGTTGAAGAGGACTGAGATGAAGCAGCAAAAGATGATGAATTTCTTAGCAAGAGCTATTCAGAATCCGAACTTCGTGCAGCAATTGATTCAGCACAAGGATATGAGAAAAGAACTGGAAGAAGTAATCTCCAAGAAGAGAAGGAGGCCTATTAATCAAGGGCCTAGTACTTTCGAAGTAGCAGATATAATCCATGTTGAACAGCTTGTGAAAGATGAACCCCAGAATTACAATGACTTGACTGAGTTTGAAGTTTCTGAGCTAGACAAACTTGCTATCGATTTGCAAAGACCAGGTGAGAACGTAAACATAGAGGAAGAACAAGAACTTTTAGGAAAAGGAGTAGAACATGTAGGTAGATCAGAGAAAGATATGGACGATGGATTTTGGAAAGATTTATTGAATGATGGCATGGAAAAAGAAATTAGTGAACTAGGCGTTGAGGAAGATGAAGAAGACGTAGATATATTGGCTGAGCAGCTTCGTTATCTGGCTTCAAGTCCTAACTAG 1080 0.4139 MNTQARAKKEFQEASSSFSEGQPVLAPQPMEGLHETGPPPFLNKTYDIVEDPSTNHVVSWSRGNNSFIVWDPQAFSTSLLPRYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKTIRRRKTHQTQASQHSLDPCVEVGRFGLDGEVDRLTRDKQVLMVELVKLKQQQQNTRSYLQAMEDRLKRTEMKQQKMMNFLARAIQNPNFVQQLIQHKDMRKELEEVISKKRRRPINQGPSTFEVADIIHVEQLVKDEPQNYNDLTEFEVSELDKLAIDLQRPGENVNIEEEQELLGKGVEHVGRSEKDMDDGFWKDLLNDGMEKEISELGVEEDEEDVDILAEQLRYLASSPN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01009 359 MobiDBLite consensus disorder prediction 1 37 - -
Pte10g01009 359 ProSitePatterns HSF-type DNA-binding domain signature. 80 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte10g01009 359 Pfam HSF-type DNA-binding 41 130 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte10g01009 359 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte10g01009 359 PRINTS Heat shock factor (HSF) domain signature 41 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte10g01009 359 PRINTS Heat shock factor (HSF) domain signature 92 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte10g01009 359 Gene3D - 33 132 IPR036388 -
Pte10g01009 359 MobiDBLite consensus disorder prediction 1 23 - -
Pte10g01009 359 FunFam Heat shock transcription factor 1 34 131 - -
Pte10g01009 359 Coils Coil 157 177 - -
Pte10g01009 359 SMART hsfneu3 37 130 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte10g01009 359 SUPERFAMILY "Winged helix" DNA-binding domain 37 130 IPR036390 -
Pte10g01009 359 Coils Coil 219 239 - -
Pte10g01009 359 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 27 248 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01009 Pte-Chr10 26606895 26609008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01009 14 357 HSF AT3G22830 55.228 6.42e-137 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte10g01009 HSF_DNA-bind 2.9e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01009 K09419 - qsu:112016413 489.96