Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00986 ATGAATCGGTTTTGCCCTGAGAAATATCTGGGTGAAATCTTCTGGGATGTTGAGGTCGATCCATCTGAAAACCGAAGTGCTTTTGTTACATATAAAGAGCAACCCAGAATTGAATTTCATGGACCAAACTCCAAGAATGTGAATAAGAAGTTGATTGAGTTCGTGACGAGAAGTTGGCCAGTGGAGAAGAACGAGGCAGCTGAGTTTGAGGAGAGGTCTTTTAGGCATAAGATCAATGAAAGGATGAGAAGGCAGAGACAGAAGCAGGGTTGTTTAGCTTTGCATTCATTGTTACCACATGGAACAAAGAGTGATACTAGTTCTATAATTCAAACAGCAACCAAGGAGATTCAAAGGCTGCAAGCACATAGACATGTGCTGCTGACGAAAAAGGATGAGCTTGAAGCTGCTTCTGTAAAACCGGTGGAAAGTAATGAAGCTGTTGTTGAAGGAGCCATAATTCAATTAAGAGTGCTCAATCCAACATTTGGGTTTGATTATATTATCGACACTCTTAAATGCTTGAAGGAATTGGGTGTTGATGCTAAAAACATCAAATCAAGTTTCTCATCTGAACAGCTCTTTGGGGTGTTAGACATAGAAACCATGATTGCTGCTGATAAGGACAAAGTAAAATGCGAGGTGGAGAGAAGAGTACAGCACGAAGTGCCGAGGAAACTTCTGTCCGGTTTTGACGATGTTAAAATCCTACTACGCAGTGTGGGCGACATAGATGATGGTGGGGTCAACGACGACTTAATGAAGGTGCAATCCATAAGGAGGAAGCATGATGGACTTGGTCACTTGGGCGACTTGTCTGGAAGTGGAGGCAAGAAGCATTTAGGTAAGAGTTCACGCATAACACCAACTTTTGTTGGACCCATCTACCTTTTCAATTTCTCAGCTGTTCTATGA 915 0.4219 MNRFCPEKYLGEIFWDVEVDPSENRSAFVTYKEQPRIEFHGPNSKNVNKKLIEFVTRSWPVEKNEAAEFEERSFRHKINERMRRQRQKQGCLALHSLLPHGTKSDTSSIIQTATKEIQRLQAHRHVLLTKKDELEAASVKPVESNEAVVEGAIIQLRVLNPTFGFDYIIDTLKCLKELGVDAKNIKSSFSSEQLFGVLDIETMIAADKDKVKCEVERRVQHEVPRKLLSGFDDVKILLRSVGDIDDGGVNDDLMKVQSIRRKHDGLGHLGDLSGSGGKKHLGKSSRITPTFVGPIYLFNFSAVL* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00986 304 Gene3D - 62 137 IPR036638 GO:0046983
Pte10g00986 304 Coils Coil 117 137 - -
Pte10g00986 304 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 22 223 IPR044658 -
Pte10g00986 304 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 120 IPR011598 GO:0046983
Pte10g00986 304 Pfam Helix-loop-helix DNA-binding domain 75 121 IPR011598 GO:0046983
Pte10g00986 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 135 IPR036638 GO:0046983
Pte10g00986 304 SMART finulus 77 126 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00986 Pte-Chr10 25845900 25847890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00986 14 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 33.990 8.60e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte10g00986 HLH 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00986 - - qsa:O6P43_021477 219.935