Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00985 ATGGCGGACGTTGAGGCTGATGTTGCGACCGGACTGCCGAAGAAGAGAACATTTAAGAAGTTCAGCTTCAGGGGTGTCGATTTGGATGCTCTCCTTGACATGTCTACTGAAGAGCTTGTCAAAATGTTCAATGCCAGAGCTCGCAGAAGAGAAGCTCCCCCTGGTGAGAAGCCCGAACCAGTTCGAACCCACCTTCGCAATATGATAATTGTGCCCGAGATGATTGGAAGCATCATTGGTGTATACAATGGTAAGACCTTCAATCAGGTTGAAATTAAGCCTGAAATGATTGGTCATTACTTGGCGGAGTTCTCCATTTCATACAAGCCTGTCAAGCATGGTAGACCTGGTATTGGTGCCACTCACTCTTCAAGGTTTATTCCTCTCAAGTGA 393 0.4656 MADVEADVATGLPKKRTFKKFSFRGVDLDALLDMSTEELVKMFNARARRREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00985 130 Gene3D 30s Ribosomal Protein S19; Chain A 9 130 IPR023575 GO:0003735|GO:0005840|GO:0006412
Pte10g00985 130 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 10 50 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pte10g00985 130 PIRSF RPS19p_RPS19a_RPS15e_RPS19o 8 130 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pte10g00985 130 FunFam 40S ribosomal protein S15 47 130 - -
Pte10g00985 130 NCBIfam 30S ribosomal protein S19 49 130 IPR005713 GO:0003735|GO:0006412|GO:0015935
Pte10g00985 130 ProSitePatterns Ribosomal protein S19 signature. 83 107 IPR020934 GO:0003723
Pte10g00985 130 Pfam Ribosomal protein S19 47 113 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pte10g00985 130 SUPERFAMILY Ribosomal protein S19 47 114 IPR023575 GO:0003735|GO:0005840|GO:0006412
Pte10g00985 130 Hamap 30S ribosomal protein S19 [rpsS]. 14 119 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pte10g00985 130 PRINTS Ribosomal protein S19 family signature 63 82 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pte10g00985 130 PRINTS Ribosomal protein S19 family signature 95 110 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pte10g00985 130 PRINTS Ribosomal protein S19 family signature 83 95 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00985 Pte-Chr10 25844442 25845593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00985 1 131 Cytoplasmic Ribosomal Protein Gene Family AT1G04270 75.658 1.52e-75 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00985 K02958 - qsa:O6P43_006944 232.261