Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00966 ATGGCAAATCCCTGGTGGACCGGCGGTCAGGTCGGCTTGCCGAGCACGGAACTGGCAGCCAATTCATCTATGCTTAACAAACGCCATACTGAGCTTTCGGTCAATGGAATCAGCAGCAGAAGCAGCGGAAGAGATGAAGATGAAGACAGAGATGAAGCTGATGAGCCTAACGAGGGTGCCGTTGATGTTGGTGCCAGAAGACCAAGAGGCCGACCTCCTGGATCTAAAAATAAACCCAAACCACCAATCTTTGTGACAAGGGACAGCCCAAATGCTCTGATGAGTCATGTGATGGAGATAGCTGGTGGTGCTGATGTTGCAGAAAGCATAGCTCAGTTTGCAAGAACGCGTCAACTTGGGGTTTCTGTACTCAGTGGCAGCGGTGCTGTGGCCAACGTAACTCTCAGACAACCAGCGGCACCCGGAGCTGTGGTGGCACTTCGCGGCAGGTTTGAAATTCTATCTCTGACCGGCGCATTCTTTCCTGGACCCGCCCCGCCAGGTTCAACGGGGTTATCTGTGTATCTTGCTGCGGTTCAGGGTCAGGTTGTTGGAGGAATTGTTGTTGGACCTTTGGTAGCAGATGGGCCAGTTATGGTCACTGCTGCAACTTTTTCTAATGCAACATATGAGAGATTGCCTTTGGAAGATGATGATGAGGGAGGTAGCTCTGCTCAAGGTGCCGGTGCAAACTCTTCATCGGCCATAGGAAGTAATGGGGGCCAGTTACAGGCAGGGGTTCCTGATCCATCTTCACTGCCCGTGTATAATCTGCCTCCAAACCTAATGCCCAAAGCAGGCCACGTAGGGCACGAAGCTTATGCTTGGAATCGTGGAAGGCCACCTTACTAA 852 0.52 MANPWWTGGQVGLPSTELAANSSMLNKRHTELSVNGISSRSSGRDEDEDRDEADEPNEGAVDVGARRPRGRPPGSKNKPKPPIFVTRDSPNALMSHVMEIAGGADVAESIAQFARTRQLGVSVLSGSGAVANVTLRQPAAPGAVVALRGRFEILSLTGAFFPGPAPPGSTGLSVYLAAVQGQVVGGIVVGPLVADGPVMVTAATFSNATYERLPLEDDDEGGSSAQGAGANSSSAIGSNGGQLQAGVPDPSSLPVYNLPPNLMPKAGHVGHEAYAWNRGRPPY* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00966 283 FunFam AT-hook motif nuclear-localized protein 93 220 - -
Pte10g00966 283 MobiDBLite consensus disorder prediction 22 40 - -
Pte10g00966 283 CDD DUF296 96 177 IPR005175 -
Pte10g00966 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 277 IPR014476 GO:0003680
Pte10g00966 283 MobiDBLite consensus disorder prediction 22 85 - -
Pte10g00966 283 PIRSF ESCAROLA 10 283 IPR014476 GO:0003680
Pte10g00966 283 ProSiteProfiles PPC domain profile profile. 90 228 IPR005175 -
Pte10g00966 283 MobiDBLite consensus disorder prediction 214 259 - -
Pte10g00966 283 MobiDBLite consensus disorder prediction 225 246 - -
Pte10g00966 283 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 207 IPR005175 -
Pte10g00966 283 SUPERFAMILY AF0104/ALDC/Ptd012-like 93 218 - -
Pte10g00966 283 Gene3D - 95 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00966 Pte-Chr10 24451954 24452914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00966 1 284 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 61.379 3.47e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00966 - - qsa:O6P43_021453 329.331