Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00965 ATGTGGATTGAAAAGGAAGTCTTATCATATGAAATGTTAAGAATTTTGTCATTTGGGCTTCTGATTTTAGCGCTCCCCGTTTGTGTGTTTGCAAATGACGGTGGATATTCGAGATGTAATTGTGATGATGAGGGCAGCTTGTGGAGTTTTGAGAGCATTGTTGAGACCCAAAAAGTAAGTGATTTCCTGATCGCAGTGGCTTACTTCTCAATCCCCATCGAGCTGCTTTACTTTGTTAGCTGCTCAAACGTCCCATTCAAATGGGTCCTTTTTCAGTTCATTGCTTTCATTGTGTTGTGTGGGATGACTCATCTGCTCAATGGATGGACTTATGGACCACATTCCTTTCAGCTTATGCTGGCACTCACAGTGTTCAAAATCCTCACTGCTTTGGTATCATGTGCTACTGCTATCACCCTCGTAACTCTGATCCCTCTGCTTCTCAAAGTGAAGGTGAGAGAAATTATGCTCCAGAAAAAGACATGGGATCTTGGTCTGGAGGTTGGCATGATAATGAAAAAGCAACAAGCTGCTATGCATGTGAGGATGCTTACACAAGAGATTCGTAAGTCCATCGACAGGCACACTATCTTGTACACTACTTTAGTTGAGTTGTCTAAAACATTGGGATTGCATAACTGTGCAGTTTGGATGCCAAATGAGTTCAGGACAGAGATGATCCTGACCCATCAATTAAATGGAAGGAATCATAATTATACAATACCTATTACAGATCCAGATGTTAAAATAATCAAGGGGAGTGAGTCCGTGAACATTCTTGAGCCTGATTCACAACTTGCTGTTGCTAGTACCGGACAATCCAGTGAGCCTGGACCAGTGGCTGCTATAAGGATGCCAATGCTTCGAGTTGGCAATTTTAAAGGTGGAACCCCAGAGCTAATTCAAGCATGTTATGCAATATTGGTTTTGGTTCTTCCCAGTGGACAACCTAGAACTTGGAGCTCACATGAGTTAGAGATCATCAAAGTTGTTGCTGACCAGGTGGCTGTGGCTCTCTCTCATGCTGCGATTCTCGAAGAGTCCCAGCTCATGAGAGAGAAATTAGAGGAACAAAATCGAGCTCTTCAACAAGCAAAAATGGATGCTATGATGGCTAGCCAGGCTAGAAACTCGTTTCAGGAGGTAATGTGCGATGGAATGAGGAAGCCAATGCACTCGATTTTAGGATTGCTTTCAATATTACAGGTTGAGAATATAAATTCTGAACAAAGGGTTATTGTGGATGCAATGTTAAGGACAGGCAGTGTTCTCTCTACCTTGATAAATGATGCCATGGACAGTTCAAGGAAAGATGCTAGGAGATTTCCCTTGGAGATTAGCTCTTTCAGTTTGCATTCCATTCTAAAAGAATCAGCTTATCTTTCCAAGTGGGTGTGCCTTTATAGGGGTTTTGGTTTTTCTGTTAAAGTGGATAAGTTCTTGCCTGATATTGTAATGGGTGATGAAAAAAGAGTTTTTCAGGTGATTTTGCATATGGTTGGCAATCTACTAGAAGGGAACCCTGGGGGTGGGACTGTTGTACTTGGGATCTTTCCAGAGAGAGGAAGTCAGGAAAGAAATGAACAGAGACAGATGGCCTGGAGACAGGGTTTCTCTGATGGTAATATATATTTAAGACTTGAGCTGGGGATAAACTATGATGATGCTCTGTCGAAGGTGCCAGTTTTCAGAAGACAGCATGTTGGCAGGCTCTATGCCAATAACAGGGTTGAAGGGGGGTTGAGCTTCAGTATTTGTAAAAGGATAGTTCAGTTGATGCAAGGTAACATATGGGTAACACACAACTTAGAAGGTCATCCCCAAAGCATGGCTGTTACTCTTAGGTTTCAATTACAGCCATCCATAGCTATAGCTAATCCAGAATCTTCAGATTGTTCATACTCTAATTTGCTCTTCAGAGGATTAAGAGTTCTGCTAGCTGATCATGATGATGTGAATAGGGTTGTCACGCAAAAGCTGCTTGAGAAGCTAGGTTGCTATGTCACTTCTGTTTCTTCTGGAGTTGAATGTCTCTCAGCCATTAGTCCAGCTGGTTCTAGTGTCCGAATTGTCCTTTTGGATCTTCATATGCCCGACCTAGATGGCTTTGAAGTTGCCATAAGGATCCAGAAGTCCCGAAGCCGAAGCCGAGGCTGGCCCTTGATACTTGCACTCACTTCAAATGCAGATGAAGATGTATGGGAGAGATGTAGGCAAATTGGAATGAATGGAGTGATCGGGAAACCAATTTTGTTGCAAGGCATTGCTAGTGAACTTCGACGAGTCTTGGTGCAGGGAAATAACTTTGCCTGA 2313 0.4272 MWIEKEVLSYEMLRILSFGLLILALPVCVFANDGGYSRCNCDDEGSLWSFESIVETQKVSDFLIAVAYFSIPIELLYFVSCSNVPFKWVLFQFIAFIVLCGMTHLLNGWTYGPHSFQLMLALTVFKILTALVSCATAITLVTLIPLLLKVKVREIMLQKKTWDLGLEVGMIMKKQQAAMHVRMLTQEIRKSIDRHTILYTTLVELSKTLGLHNCAVWMPNEFRTEMILTHQLNGRNHNYTIPITDPDVKIIKGSESVNILEPDSQLAVASTGQSSEPGPVAAIRMPMLRVGNFKGGTPELIQACYAILVLVLPSGQPRTWSSHELEIIKVVADQVAVALSHAAILEESQLMREKLEEQNRALQQAKMDAMMASQARNSFQEVMCDGMRKPMHSILGLLSILQVENINSEQRVIVDAMLRTGSVLSTLINDAMDSSRKDARRFPLEISSFSLHSILKESAYLSKWVCLYRGFGFSVKVDKFLPDIVMGDEKRVFQVILHMVGNLLEGNPGGGTVVLGIFPERGSQERNEQRQMAWRQGFSDGNIYLRLELGINYDDALSKVPVFRRQHVGRLYANNRVEGGLSFSICKRIVQLMQGNIWVTHNLEGHPQSMAVTLRFQLQPSIAIANPESSDCSYSNLLFRGLRVLLADHDDVNRVVTQKLLEKLGCYVTSVSSGVECLSAISPAGSSVRIVLLDLHMPDLDGFEVAIRIQKSRSRSRGWPLILALTSNADEDVWERCRQIGMNGVIGKPILLQGIASELRRVLVQGNNFA* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00965 770 SUPERFAMILY GAF domain-like 196 342 - -
Pte10g00965 770 Gene3D - 441 621 IPR036890 -
Pte10g00965 770 Gene3D - 637 766 - -
Pte10g00965 770 CDD HATPase_ETR2_ERS2-EIN4-like 481 614 - -
Pte10g00965 770 SMART REC_2 642 763 IPR001789 GO:0000160
Pte10g00965 770 FunFam Ethylene receptor 640 766 - -
Pte10g00965 770 SUPERFAMILY CheY-like 639 763 IPR011006 -
Pte10g00965 770 SMART gaf_1 193 349 IPR003018 GO:0005515
Pte10g00965 770 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 36 765 - -
Pte10g00965 770 CDD HisKA 373 436 IPR003661 GO:0000155|GO:0007165
Pte10g00965 770 SMART HisKA_10 375 440 IPR003661 GO:0000155|GO:0007165
Pte10g00965 770 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 487 617 IPR003594 -
Pte10g00965 770 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 360 440 IPR036097 GO:0000155|GO:0007165
Pte10g00965 770 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 429 604 IPR036890 -
Pte10g00965 770 CDD REC_ETR-like 642 759 - -
Pte10g00965 770 ProSiteProfiles Histidine kinase domain profile. 382 620 IPR005467 -
Pte10g00965 770 Coils Coil 345 375 - -
Pte10g00965 770 PIRSF Ethylen_sen_hybr_HK 12 770 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Pte10g00965 770 FunFam Ethylene receptor 4 342 436 - -
Pte10g00965 770 Gene3D - 341 438 - -
Pte10g00965 770 ProSiteProfiles Response regulatory domain profile. 643 763 IPR001789 GO:0000160
Pte10g00965 770 Gene3D - 171 340 IPR029016 -
Pte10g00965 770 Pfam GAF domain 193 339 IPR003018 GO:0005515
Pte10g00965 770 Pfam Response regulator receiver domain 644 753 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00965 Pte-Chr10 24362880 24367413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00965 31 763 Miscellaneous Gene Families AT3G04580 55.496 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte10g00965 GAF 3.4e-13 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00965 K14509 - qsa:O6P43_003256 1088.17