Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00959 ATGGCAGAGGAAAAATTGGATCCTCAAGTTGAAATGGGTGATTCAATTGACATTGCAATTGAGACTGTTTTAGATGCATCTACTCCTAGTAAAGTCAATGACGTTGAATTGAGGGTCGGAATGGAATTTAAATCAAGAGAAGAAGTACAACAACTATATCAAGAGTACGCCAAATCTAAGGGCTTTCAAATTTGTCGACGAAATTCGCGTCCTAAGATTCTAATGTTAGTTTGTCATAGGAAAGGTTTACCTCAATTAAAGTGTAAATCGAAGCGAAAAGTACAAGCTTTAGAAAGTATTCCTGACACTAAATCATGTAAAATTGGTTGTCTTGCTAGTCTACATTATTCTCTTGATTCCACTGTCAATATGTGGAGAATAACAAAGTTTGTAGATGACCACAATCACGAAATGTGA 417 0.3549 MAEEKLDPQVEMGDSIDIAIETVLDASTPSKVNDVELRVGMEFKSREEVQQLYQEYAKSKGFQICRRNSRPKILMLVCHRKGLPQLKCKSKRKVQALESIPDTKSCKIGCLASLHYSLDSTVNMWRITKFVDDHNHEM* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00959 138 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 25 138 - -
Pte10g00959 138 Pfam FAR1 DNA-binding domain 52 138 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00959 Pte-Chr10 24168928 24169344 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pte10g00959 FAR1 2.9e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00959 - - tpra:123886791 73.1738