Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00952 ATGAAGACAACAATGGCGGGCTGTGGGCGAGGCAATTTTTTAGCTAAACTGGAAGTGGGTAATGTAGATCTTACTCAGTTTCTCATAGCTGCAGCTGAAAAGGCAAGCCTCAGACAATTTGATCTCGCAAAAAGTTTACTCTTACGCTGTCAATTGGTGTCACCAACAATAGACAACCCAATACATCAGGTAATTTTCTCGTTTGTTGAAGCACTTCTAGAGAAAATTGAAAATGAGACGAGATGTATAACATTTTTGGGATCTAAGAGCAGTGAAGTGAAGGAATTACTCTTGACTTTTATTCCAGAGTTGCTTGCTACATACCACAAGTTTATTCCTCCAAATCAAGTAACGCAGTTCGCAGGGATACAAACAATTTTAGACAACGTTGCATCCAAGAGCAAAATTCATGTAATTGATCTTGACGTTGGCTGTGGAGTTCTCTGGACTCTGTTTATGCAGGCGTTGGCTGAGAGAAAGCAGAAGCTTGTGAAGATTCTCAAAATAACCACTATTGCATTAAAAGGCAAAACGAGAGCAGTAGAAGAGATTGGGAAAAGGTTGTCAAGTGTAGCTGAATCCTTGAACATACCCTTCTCATTTAAAGTAATACGGTTGAGAGAAATGACAAAACTCGAGCAAAACCAATTTGGAATCGAGAGAGGTGAAATAGTCATTGCTTACTCTATATATGCACTCGGGACTATGATCCCAAAGCCTGTTTGGTTGGAGCACTGGACCCCTTTGATTTCCCTTTCAGCTTGGAAGTTTCGGTGA 777 0.4054 MKTTMAGCGRGNFLAKLEVGNVDLTQFLIAAAEKASLRQFDLAKSLLLRCQLVSPTIDNPIHQVIFSFVEALLEKIENETRCITFLGSKSSEVKELLLTFIPELLATYHKFIPPNQVTQFAGIQTILDNVASKSKIHVIDLDVGCGVLWTLFMQALAERKQKLVKILKITTIALKGKTRAVEEIGKRLSSVAESLNIPFSFKVIRLREMTKLEQNQFGIERGEIVIAYSIYALGTMIPKPVWLEHWTPLISLSAWKFR* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00952 258 ProSiteProfiles GRAS family profile. 15 258 IPR005202 -
Pte10g00952 258 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 237 IPR005202 -
Pte10g00952 258 Pfam GRAS domain family 25 244 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00952 Pte-Chr10 23129451 23132717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00952 17 244 GRAS Transcription Factor Family AT5G17490 24.017 1.76e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte10g00952 GRAS 2.3e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00952 - - qsa:O6P43_010862 194.897