Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00941 ATGGAGGGTAAGGAGCTTAATTTGAACAACGACAAATATAAGTCTAGTAACGATGGATTCATTGATAGAAGCAAAGTGAAAATTTTGTTATGTGATAATGATAGCAAGAGTTCTGAAGAGGTTTTTACGCTGCTCTTGAGATGCTCTTATCAAGTTACTTCGGTGAAATCAGCTAGACAGGTTATTGATGCTCTTAATGCAGAGGGACCAGATATAGACATCATACTATCTGAAGTTGATCTTCCAATGGGAAAAGGTATGAAGATGCTAAAGTACATTGCACGGGATAAAGAATTACGCCGGATTCCTGTCATAATGATGTCGGCACAAGATGAGGTTTCGATTGTTGTCAAGTGCTTGAGACTTGGAGCTGCTGACTATCTTGTGAAGCCATTACGCACAAATGAACTGTTAAACTTGTGGACACACATGTGGAGAAGACGGCGTATGCTTGGGTTGGTGGAGAAGAGCCTCATGAGCTATGACTTTGATATCATGGCATCAGATCCTAGTGATGCTAACACAAACAGTACTACCTTATTCTCTGATGACACAGATGACAAGTCCCGTAGAAGCACTAATCCTGAGACGGCAATGGCAATGCAACTGGAGGATGAGTCCTATGCTGCTGCTGCTGGTACAGGTAATGAGGTTTCACATACTCATGTATCAGGATATCAACCTGATGTGCCAGGAATCAGTGATAGGATCAGTGATCGTAGAACTGAACTTGCAGGAAATCTTTCTTCTGGTCCAAAGAAGAGTGAACTAAGGATCGGTGAGTCTTCTGCCTTCTTTACTTATGTGAAGTCATCAATAGCCAGAAGCAATTCCCAGAGGATAGGTCCTGTAGATGAGAATTCCGCTCAATGTGGAAAGGTGAAAGATAGAAAACAAGGACGCAGCTCAGAGGATGCCACTGATTTGTCATTGCATGACAATGGAGAGATATGGGAGAGATATTCACGAGAAGACTTACCTAACAGTAATAGCATCCCAGATTCTCTTTCCCTGGAGAGATCATGTACTCCACCCACATCAACCGACCATTCCCTGAAAAGGGATTCAGAGGAAAAAGATTTGCCTCAGGGGATGCTTTATCCAAAATCTGGGAGTCGAGGTCCTGAGCTTGATATGTCCCACTTGCCTCCCCAACATGCTTATCCATATTACATGTCAGGTGTTGTGAATCAGGTTATGATGCCTTCATCAGCACATCTGTATCCAAACAACATGGACATGCAGAATCATGCTATGATTGCACAGTATAACCAACAGATTGCTCAATGTTCACATGCCAATGGCATGACATCCTTTCCATACTACCCAGTTGGTTATTGTTTACAACCTGGTCAAATATCTGCGAATCATTCGTGGCCCTCGTTTGGAAATTCAAGCGGTTCAGAAGTAAAACTAAGTAAAGTTGATCGGAGAGAAGCAGCATTAATGAAGTTTAGACAGAAAAGAAAGGAACGTTGTTTTGATAAGAAAATTAGGTATGTTAATAGGAAACACCTTGCAGAGAGGAGGCCACGTGTGCGAGGGCAGTTTGTTAGGAAGGTCAATGGTGTTAATGTGGACCTTAACGGGGAACCAACTTGCGCTGACTTTGAAGAGGACGATGAAGAGGATGAGGAGGAGCGTGCTGGGAGAGAGTCGTCCCCAGAGGATAATGACTGA 1680 0.4304 MEGKELNLNNDKYKSSNDGFIDRSKVKILLCDNDSKSSEEVFTLLLRCSYQVTSVKSARQVIDALNAEGPDIDIILSEVDLPMGKGMKMLKYIARDKELRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKSLMSYDFDIMASDPSDANTNSTTLFSDDTDDKSRRSTNPETAMAMQLEDESYAAAAGTGNEVSHTHVSGYQPDVPGISDRISDRRTELAGNLSSGPKKSELRIGESSAFFTYVKSSIARSNSQRIGPVDENSAQCGKVKDRKQGRSSEDATDLSLHDNGEIWERYSREDLPNSNSIPDSLSLERSCTPPTSTDHSLKRDSEEKDLPQGMLYPKSGSRGPELDMSHLPPQHAYPYYMSGVVNQVMMPSSAHLYPNNMDMQNHAMIAQYNQQIAQCSHANGMTSFPYYPVGYCLQPGQISANHSWPSFGNSSGSEVKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKHLAERRPRVRGQFVRKVNGVNVDLNGEPTCADFEEDDEEDEEERAGRESSPEDND* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00941 559 MobiDBLite consensus disorder prediction 533 550 - -
Pte10g00941 559 SUPERFAMILY CheY-like 24 151 IPR011006 -
Pte10g00941 559 Gene3D - 26 226 - -
Pte10g00941 559 MobiDBLite consensus disorder prediction 212 235 - -
Pte10g00941 559 Pfam Response regulator receiver domain 28 139 IPR001789 GO:0000160
Pte10g00941 559 ProSiteProfiles CCT domain profile. 478 520 IPR010402 GO:0005515
Pte10g00941 559 MobiDBLite consensus disorder prediction 276 378 - -
Pte10g00941 559 MobiDBLite consensus disorder prediction 174 194 - -
Pte10g00941 559 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 204 IPR045279 GO:0009736
Pte10g00941 559 ProSiteProfiles Response regulatory domain profile. 27 145 IPR001789 GO:0000160
Pte10g00941 559 SMART REC_2 26 141 IPR001789 GO:0000160
Pte10g00941 559 Pfam CCT motif 478 520 IPR010402 GO:0005515
Pte10g00941 559 MobiDBLite consensus disorder prediction 324 349 - -
Pte10g00941 559 MobiDBLite consensus disorder prediction 527 559 - -
Pte10g00941 559 MobiDBLite consensus disorder prediction 290 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00941 Pte-Chr10 22002115 22005598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00941 18 558 Response Regulator Gene Family AT5G61380 50.241 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pte10g00941 Response_reg 2.4e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00941 K12127 - qsa:O6P43_022870 723.005