Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00936 ATGGGTTGCGTGAGCTCGAAGCAGGCCGTGACACCAGCTGTAGATCACTCAGGTGCGTTTCGGAGTAATGTAGGTACAGGGGATTCGGATCGGAGATATATCGGGTTGGGAGAGTCCGAGAAGAAAGGCAAGAAGAGTGAGTTAGTGGGGTTGAATGTTGGAGGGAGCGAGTTGGGTGAGTCAGGGAGGGCTAGTTCGAATTGCAATTCTGAATCTTTAAGCTTCAGGTTAGGGAATTTGCAGAAGTATGTGGAAGGGGAGCAGGTCGCTGCCGGTTGGCCGGCTTGGCTAAGTGCTGTCGCCGGTGAAGCCATTCAAGGCTGGGTGCCTCTCCGAGCTGATACTTTTGAGAAACTGGAGAAGATTGGACAGGGTACATACAGCAGCGTCTTTCGAGCACGTAATCTTGAGACTGGCAAGCTAGTTGCTCTTAAGAAGGTGCGTTTTGACAATTTTGAGCCAGAAAGTGTAAGATTTATGGCACGAGAAATAATGATCCTCCGGAAACTCGACCATCCAAACATCATAAAATTGGAAGGCTTAATTACTTCCAGATTATCCTGTAGCATCTACCTTGTGTTTCCATACATGGAACATGACATTACAGGACTCTTGTCTTGCCCTGATATCAAGTTCAGTGAGTCACAGATTAAATGCTATATGAAGCAGTTATTATCTGGGCTAGAACACTGTCACTCCCAGGGTGTAATGCATCGTGACATTAAAGGATCAAATCTTCTGGTGAACAATGAAGGGATAGTAAAGTTGGCTGATTTTGGATTGGCTAACTTCTCTAACCCCAAACACAGGCAGCCTTTAACAAGTCGTGTTGTCACTCTATGGTACCGTCCTCCTGAGCTCTTGCTAGGTTCAACAGATTATGGCCCTTCTGTGGATCTCTGGAGCGTAGGCTGTGTGTTTGCTGAATTACTGATTGGGAAACCCGTACTTCAAGGGAGGACTGAGGTTGAACAATTGCACAAAATCTTCAAGCTCTGTGGGTCTCCGCCCGATGACTACTGGAAAAAGACCAGACTTCCCCATTCCACCCTCTTCAGACCACAGCAACAGTATGGTAGTTGTCTTCAGGAAACCTTCAAGGATTTTCCTGTATCCACTGTGAATCTGCTTGAGACTCTTCTCTCTGTAGAACCCTATAAGCGTGGGACTGCTGCAGCTGCTCTGTCGTCCGAGTATTTTAAAACAAAGCCACATGCTTGTAACCCATCAAGCTTTCCAGTCTACCCACCAAGCAAGGAAATTGATGCAAAATATAGGGAAGAAGCAAGGAGGAAAAGGACTACTGGAAGAGTTCGTGGACCAGAGACTAGAAAGACTTCAAGAAAACCACACAGAATGACCAAATTAGTCCCTACTGAGGAGTTACTGACAAAGTCTCGAGATTTTCAAAAACCCAATGATTGTTCAGTTACAAGCATCAAAGAAGACACGTCCTATATGCCCAAGGATCCTCCAAAGCCATCAATTTGTAAAGATGATGCTTCCCATGTGAAGAATGCATCTCAAGGCGACATTCCATTCTCTGGTCCATTACAAGTTTCAACCTCAAGTGGCTTTGCGTGGGCCAAAAGAAGAAAAGATGATACCTGTACTAGATCCCACACTCGGTCAATATCAAGAGGACATATTTTCTATCCCCTAGAAACTAGTGTTTTGAGTTCAAGGAATAATTTTGATTCAGCAGAGCAGGAAAATAAGGACCTCAATGGATGTTTCACCCACTCTAGAAAGCATGATATGTATGAAAGATCCAGGCTTGCATTTCATAACCAATGGGGTCAATTAGAACGCCCAGATTCATTTGATGCTTCTGAAGAGTACCACTCACAAGAACTGTCAATGGCACTTTATCAGAGAGAGGAAATGGGATCCAAAAGAAGTAACCTGAGTTACCAAGATCAAGGAGAAAAGGTTGAATTTTCAGGACCCTTGCTATCTCAAATGCATGCAATTGATGAATTGTTAGAAAGACATGAGCGCCACATTCGTCAGACAGTTCGAAGATCATGGTTTCAGAGAGGTAAGAAGAATGTATAA 2058 0.4441 MGCVSSKQAVTPAVDHSGAFRSNVGTGDSDRRYIGLGESEKKGKKSELVGLNVGGSELGESGRASSNCNSESLSFRLGNLQKYVEGEQVAAGWPAWLSAVAGEAIQGWVPLRADTFEKLEKIGQGTYSSVFRARNLETGKLVALKKVRFDNFEPESVRFMAREIMILRKLDHPNIIKLEGLITSRLSCSIYLVFPYMEHDITGLLSCPDIKFSESQIKCYMKQLLSGLEHCHSQGVMHRDIKGSNLLVNNEGIVKLADFGLANFSNPKHRQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLIGKPVLQGRTEVEQLHKIFKLCGSPPDDYWKKTRLPHSTLFRPQQQYGSCLQETFKDFPVSTVNLLETLLSVEPYKRGTAAAALSSEYFKTKPHACNPSSFPVYPPSKEIDAKYREEARRKRTTGRVRGPETRKTSRKPHRMTKLVPTEELLTKSRDFQKPNDCSVTSIKEDTSYMPKDPPKPSICKDDASHVKNASQGDIPFSGPLQVSTSSGFAWAKRRKDDTCTRSHTRSISRGHIFYPLETSVLSSRNNFDSAEQENKDLNGCFTHSRKHDMYERSRLAFHNQWGQLERPDSFDASEEYHSQELSMALYQREEMGSKRSNLSYQDQGEKVEFSGPLLSQMHAIDELLERHERHIRQTVRRSWFQRGKKNV* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00936 685 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Pte10g00936 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Pte10g00936 685 MobiDBLite consensus disorder prediction 427 451 - -
Pte10g00936 685 Pfam Protein kinase domain 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00936 685 CDD STKc_CDK9_like 116 400 - -
Pte10g00936 685 Gene3D Transferase(Phosphotransferase) domain 1 199 439 - -
Pte10g00936 685 SUPERFAMILY Protein kinase-like (PK-like) 110 405 IPR011009 -
Pte10g00936 685 FunFam probable serine/threonine-protein kinase At1g54610 199 439 - -
Pte10g00936 685 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00936 685 PANTHER CELL DIVISION PROTEIN KINASE 114 404 - -
Pte10g00936 685 Gene3D Phosphorylase Kinase; domain 1 103 198 - -
Pte10g00936 685 MobiDBLite consensus disorder prediction 427 443 - -
Pte10g00936 685 FunFam probable serine/threonine-protein kinase At1g54610 103 198 - -
Pte10g00936 685 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00936 Pte-Chr10 21934458 21940191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00936 108 460 Core Cell Cycle Gene Families AT5G10270 46.612 2.23e-107 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte10g00936 Pkinase 1.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00936 - - qsa:O6P43_001986 1069.3