Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00932 ATGAACGGAAGAGAAGATAGAGTTGTCGATCGGATCAGGATCTGTAACTTGATTCGCCTTCTAGTTCTGCAGGAAATCTCCAACTTTCTACTATACTCTCTTGAAATTGCAACATCAGAAGTGACAGAGCTTTCTGGTCTGCTCTTCAATGCAGGACATTCAAACATCATTGAGAATCAAAGAGGAACAGTCCAAGACTGTCAGGAACTTCACCAAATCATAGTTTCATCTTTACAAAGATCTGTTTCACGGGTTCGCATTGGTGACTCCAGAAAACAACTGGATGATGCAAGAGCCTACTTGAGTGCAACACTCACAAACAAGGAGACATGCTTGGCGGGTCTGGACTCTGCTTCAGGTCCTTTGAAGACAGTTTTGCTGAACTCCTTAATTGATGCATACAAGCATGCAAGCAAAAAAAGCCAAGAAGAACAGGCGCCTAATGAGTTTCCCTTCATGGTTTCAAAGAATAAACATCGGATACTGCTGAGTCTGGATGAAGATTATGATACAAGTGAAGTGCTTACTGTAGCTGCAGATGGCGCAGGAAACTTTACAAAGGTCATGGATGCTGTGAATTTTGCGCCAAATAACAATTTTGACAGGACAATTATATTTGTCAAACAAGGTGTTTATCAAGAAAATGTGGAAATCCCAAGTTATAAGACAAACATTGTGATGCTTGGAGATGGAAGTGATGTCACTATTATCAAAGGCAACAGACGTGTAGCTGGAGGTTGGACCACCTTCAGATCAACCACTCTAGGTGAATCCTCTATCAGTCTATCTCTAACATAA 798 0.4123 MNGREDRVVDRIRICNLIRLLVLQEISNFLLYSLEIATSEVTELSGLLFNAGHSNIIENQRGTVQDCQELHQIIVSSLQRSVSRVRIGDSRKQLDDARAYLSATLTNKETCLAGLDSASGPLKTVLLNSLIDAYKHASKKSQEEQAPNEFPFMVSKNKHRILLSLDEDYDTSEVLTVAADGAGNFTKVMDAVNFAPNNNFDRTIIFVKQGVYQENVEIPSYKTNIVMLGDGSDVTIIKGNRRVAGGWTTFRSTTLGESSISLSLT* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00932 265 NCBIfam pectinesterase inhibitor domain 26 122 IPR006501 GO:0004857
Pte10g00932 265 SUPERFAMILY Pectin lyase-like 172 255 IPR011050 -
Pte10g00932 265 Pfam Plant invertase/pectin methylesterase inhibitor 31 124 IPR006501 GO:0004857
Pte10g00932 265 CDD PMEI-like_3 26 138 - -
Pte10g00932 265 SMART PMEI_2 7 133 IPR006501 GO:0004857
Pte10g00932 265 ProSitePatterns Pectinesterase signature 1. 199 218 IPR018040 -
Pte10g00932 265 Gene3D - 169 262 IPR012334 -
Pte10g00932 265 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 140 IPR035513 -
Pte10g00932 265 PANTHER PECTINESTERASE 55 256 - -
Pte10g00932 265 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 138 IPR035513 -
Pte10g00932 265 Pfam Pectinesterase 176 257 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00932 Pte-Chr10 21907291 21913653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00932 18 258 Carbohydrate Esterase AT2G26440 51.321 5.64e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00932 - - qsa:O6P43_021970 288.885