Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00931 ATGACAGAGGAAGAAACAGACTCGTGGGGCATCTCATTAATCCTTGTCTTTACACTCATCACAGAAGTCACAGTTGTCGCCGGAGATTCTCTGGACACTGACAGACAAGTCCTGCTGAATCTGAAATCGTATCTACAACAGACAAACCGTTTCAACACAGGACCCTATTCAGGATGGAATGACCACAGCAGTAATCCCTGCGATTGGTCAGGAATCTTCTGCAGCCCTAATGGGACAACAAGAAGAGTCACTAGAATTGACCTTTCTGATAGCAACATCTCCGGTGAGATGTTCCAGCAGTTCTCAAAGCTCACTGAGCTCACCTATCTTGATCTTTCAAAGAACACACTCAGTATTGTTCCACCTGATTTAAGTCTGTGTCAAAAGCTTATGTATCTCAACCTCTCGCACAATATTCTGATGGGGGAGTTGAACTTGACGGGGTTAAATCGACTGGAGATACTGGACATCTCGGTTAATAGAATTCATGGAGATATTGGGTCGTTTCCTGCCATCTGTGCCAATCTTGTGACTCTGAATATTTCAGAGAATAACTTCACTGGTAGTATTGGTAAGTCCTTTGATCAATGCTTGAAGCTACAGCACTTGGATTTGAGCACCAATTATTTCAATGGAAACTTGTGGCCGGGGTTTCCAAGGCTGAAAGAGTTCTCCGTTTCTGAAAATTACCTAACTGGTCCTGTCTTGCCATCATTTTTTAATGGGAATTGTAATCTACAAGTTTTAGACCTATCTCAAAATAGCTTTGTTGGTGAGCTCCCCAAGGAGGTTTCCACTTGCGAGAACTTGGTTATGTTGAATCTATGGGGCAATAATTTCACTGGTAATGTTCCCTCTGAGATAGGAGAAATTTCATCTCTGGAAGAATTATACTTGGGGAACAACAGTTTCCAAAGAGATATACCAGAAACCCTTCAGAACTTGGAAAAGTTGACATTTTTGGATTTTAGCAGAAACAGATTTGGTGGAAAGGTACAAGAGATATTCGGGAAAATGACACAGGTGAAGTCTCTTCTGTTGCATTCAAATTTTTATACTGGAGGACTATACGCTTCAGGACTTCTCAAGCTTCCTAATATAGAACGATTAGATTTAAGCCACAACAATTTTACAGGCTCGTTGCCACCTGAATTTTCTCAAATGTCAAGTTTGAAGTTCTTGATGTTGTCCCATAACAATTTCTCAGGAAGAATACCATCTGAATTTGGACATATGCCAAAAATCCAATTAGTGGATCTCTCCTTCAACATGTTGAATGGTTCAATTCCAGCGAGCCTCGGGAACCTGAAGTCTCTCTTATGGTTGATGCTTGCAAATAATTCATTAACAGGCCAAATTCCCAGTGAACTGGGAAACTGTACAAGCTTGTTATGGCTTAACCTTGCAAACAACAAGCTCTCAGGGGACCTACCTTCGGAGTTGGCAAACATTGGAAGTGATGTCATGTCAACCTTTGAATCTAACCGCCAGAATCAGAGTCTTCTTGCCGGCTCAGGTGAATGCTTAGCAATGAAGAGATGGATACCTGGAGATTACCCTCCGTTCAGCTTTGTATATACAATCCTTACAAGGAAAAGTTGTAGAAGCATTTGGGACAAATTGCTTAAAGGATATGGTCTTTTCCAAATCTGCGCAGCTGGATCATCCGTACGTTCATCCCAAATATCTGGTTACGTTCTGCTAAGTGGGAATGAGCTCACAGGGGAAGTTCCCTCTAGTATCGGCAAGTTGCAGAATATCAGTATGCTGCACTTGGGTGCTAATAATTTTTATGGACATCTTCCACCCGAGATAGGAAGAATGTCTCTTGTAGTCTTAAATGTGTCCAGCAACAATTTCTCTGGTCAAATCCCCATGCAAATTGGAAACCTGGAATGTCTGCAGAATCTGGATTTTTCCCATAACAATTTTTCTGGAACGTTTCCTGCAAGCTTGAACAACTTGAATGACCTCAACAAGTTCAATGTCTCGTACAATCCATTGATCTCGGGGGTGGTTCCAACTACAGGACAGTTGTCAACTTTTGATAAAGATTCATACTTGGGTGACCCTCTTCTGCTTCTCCCAAAGTTCATTGACAACTCCACCCTTAAGTCCCCAGACCACGAAATGCCAAATGAACAGATAAGAAGGACAAAAAGGGTGTCTCGACCTTTTCTAATCATAGCACTATCTTTACTTGCCTTGCTCTCTGGGTTGGCTTTTCTCCTGGTATGCTTAACAGTGAAAAGACCATCAGTTGCGTCAGGCTACCTATTGGGGGATATAAAATACAGGCATCATCTGGCTGCAAGTTCAAGCTGTTCTTCCCCATGTTCTTGTGATACAGTTAAGGTCATCCGTTTGGACAGAACTGCTTTTACGCACGGCGATATCCTGAAAGCCACCAGAAATTTTTCTGAGGAGAGAGTTATTGGAAAGGGGGGATATGGAACTGTGTATAGAGGTGAATTACCTGATGGAAGACAAGTTGCAGTGAAAAAGCTTCAAAGAGAAGGTATTGAAGGTGAGAGGGAATTCAAAACTGAGATGGAAGTCCTAAGTAGGAATAGCTTTAGCTGGCCACATCCGAACCTAGTGACACTCTATGGTTGGTGCCTACATGGATCAGAGAAGATATTGATTTATGAATACATGGAAGGTGGAAGCCTCGAGGACCTTGTATCTGACAGAACAAGATTAACATGGCGTATGCGTATCGATGTTACTATTGATGTAGCACGTGCACTAGTGTATCTTCATCATGAATGTTATCCTTCAATTGTGCACCGTGATGTGAAGGCAAGTAATGTGCTTCTTGATAAGAATGGAAAGGCAAGACTGACAGATTTTGGCCTTGCTAGAGTCGTAGATGCTGGTGATAGCCATGTTACAACAATGGTTGCTGGAACAGTTGGCTATGTTGCCCCGGAGTATGGGCAAACCTGGAGAGCTACTACAAAAGGTGATGTTTATAGTTTTGGGGTGTTAGCAATGGAGCTAGCAACAGGTAGGAAAGCATTGGATGGAGGAGAAGAGTGTCTGGTTGAATGGGCAAGGAGGGTCATGGGGTATGGAAGACATGAATTGACATGTTCTGCAATACCTATGGTGGTGATGGGTTCTGGACTAGCTGAAGGTGCAGAAGAAATGTGTGAGCTGTTAAGAATTGGACTTAAATGCACAGCTGAGGCACCACAGGCAAGACCTAACATGAAAGAGGTCTTAGCTATGTTGATTAAGAAAACAAATACCAACGGGGAACTGAAGGCATTGCCTTAG 3282 0.4254 MTEEETDSWGISLILVFTLITEVTVVAGDSLDTDRQVLLNLKSYLQQTNRFNTGPYSGWNDHSSNPCDWSGIFCSPNGTTRRVTRIDLSDSNISGEMFQQFSKLTELTYLDLSKNTLSIVPPDLSLCQKLMYLNLSHNILMGELNLTGLNRLEILDISVNRIHGDIGSFPAICANLVTLNISENNFTGSIGKSFDQCLKLQHLDLSTNYFNGNLWPGFPRLKEFSVSENYLTGPVLPSFFNGNCNLQVLDLSQNSFVGELPKEVSTCENLVMLNLWGNNFTGNVPSEIGEISSLEELYLGNNSFQRDIPETLQNLEKLTFLDFSRNRFGGKVQEIFGKMTQVKSLLLHSNFYTGGLYASGLLKLPNIERLDLSHNNFTGSLPPEFSQMSSLKFLMLSHNNFSGRIPSEFGHMPKIQLVDLSFNMLNGSIPASLGNLKSLLWLMLANNSLTGQIPSELGNCTSLLWLNLANNKLSGDLPSELANIGSDVMSTFESNRQNQSLLAGSGECLAMKRWIPGDYPPFSFVYTILTRKSCRSIWDKLLKGYGLFQICAAGSSVRSSQISGYVLLSGNELTGEVPSSIGKLQNISMLHLGANNFYGHLPPEIGRMSLVVLNVSSNNFSGQIPMQIGNLECLQNLDFSHNNFSGTFPASLNNLNDLNKFNVSYNPLISGVVPTTGQLSTFDKDSYLGDPLLLLPKFIDNSTLKSPDHEMPNEQIRRTKRVSRPFLIIALSLLALLSGLAFLLVCLTVKRPSVASGYLLGDIKYRHHLAASSSCSSPCSCDTVKVIRLDRTAFTHGDILKATRNFSEERVIGKGGYGTVYRGELPDGRQVAVKKLQREGIEGEREFKTEMEVLSRNSFSWPHPNLVTLYGWCLHGSEKILIYEYMEGGSLEDLVSDRTRLTWRMRIDVTIDVARALVYLHHECYPSIVHRDVKASNVLLDKNGKARLTDFGLARVVDAGDSHVTTMVAGTVGYVAPEYGQTWRATTKGDVYSFGVLAMELATGRKALDGGEECLVEWARRVMGYGRHELTCSAIPMVVMGSGLAEGAEEMCELLRIGLKCTAEAPQARPNMKEVLAMLIKKTNTNGELKALP* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00931 1093 Pfam Protein kinase domain 807 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00931 1093 CDD STKc_IRAK 812 1081 - -
Pte10g00931 1093 FunFam Calmodulin-binding receptor kinase CaMRLK 219 334 - -
Pte10g00931 1093 Gene3D Ribonuclease Inhibitor 333 428 IPR032675 -
Pte10g00931 1093 FunFam Leucine-rich repeat receptor-like protein kinase 886 1090 - -
Pte10g00931 1093 Gene3D Ribonuclease Inhibitor 429 495 IPR032675 -
Pte10g00931 1093 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 219 1081 - -
Pte10g00931 1093 Gene3D Transferase(Phosphotransferase) domain 1 886 1090 - -
Pte10g00931 1093 ProSitePatterns Protein kinases ATP-binding region signature. 812 835 IPR017441 GO:0005524
Pte10g00931 1093 FunFam Leucine-rich repeat receptor protein kinase MSP1 770 885 - -
Pte10g00931 1093 SMART LRR_typ_2 291 314 IPR003591 -
Pte10g00931 1093 SMART LRR_typ_2 436 460 IPR003591 -
Pte10g00931 1093 SMART LRR_typ_2 315 338 IPR003591 -
Pte10g00931 1093 SMART LRR_typ_2 104 127 IPR003591 -
Pte10g00931 1093 SMART LRR_typ_2 388 411 IPR003591 -
Pte10g00931 1093 SMART LRR_typ_2 364 387 IPR003591 -
Pte10g00931 1093 SMART LRR_typ_2 584 608 IPR003591 -
Pte10g00931 1093 Gene3D Phosphorylase Kinase; domain 1 770 885 - -
Pte10g00931 1093 FunFam Putative LRR receptor-like serine/threonine-protein kinase 339 500 - -
Pte10g00931 1093 Gene3D Ribonuclease Inhibitor 240 332 IPR032675 -
Pte10g00931 1093 Pfam Leucine rich repeat 151 209 IPR001611 GO:0005515
Pte10g00931 1093 Pfam Leucine rich repeat 269 328 IPR001611 GO:0005515
Pte10g00931 1093 Pfam Leucine rich repeat 81 138 IPR001611 GO:0005515
Pte10g00931 1093 Pfam Leucine rich repeat 365 425 IPR001611 GO:0005515
Pte10g00931 1093 ProSiteProfiles Protein kinase domain profile. 806 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00931 1093 SUPERFAMILY L domain-like 86 481 - -
Pte10g00931 1093 Gene3D Ribonuclease Inhibitor 172 239 IPR032675 -
Pte10g00931 1093 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Pte10g00931 1093 Gene3D Ribonuclease Inhibitor 30 171 IPR032675 -
Pte10g00931 1093 Gene3D Ribonuclease Inhibitor 610 692 IPR032675 -
Pte10g00931 1093 Gene3D Ribonuclease Inhibitor 566 608 IPR032675 -
Pte10g00931 1093 SMART serkin_6 806 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00931 1093 SUPERFAMILY Protein kinase-like (PK-like) 785 1080 IPR011009 -
Pte10g00931 1093 ProSitePatterns Serine/Threonine protein kinases active-site signature. 928 940 IPR008271 GO:0004672|GO:0006468
Pte10g00931 1093 ProSiteProfiles Leucine-rich repeat profile. 106 127 IPR001611 GO:0005515
Pte10g00931 1093 SUPERFAMILY L domain-like 566 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00931 Pte-Chr10 21887634 21891899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00931 9 1079 Receptor kinase-like Gene Family AT1G55610 30.847 2.14e-146 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Pte10g00931 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00931 - - qsa:O6P43_022881 1517.29