Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00910 ATGGGGAGGCCACCATGCTGTGACAAATTAGCTGGTATTAAGAAAGGTCCATGGACGCCAGAGGAAGACATCATATTGGTCTCATACATTCAAGAACATGGACCTGGAAACTGGAGGTCTGTTCCAACTAATACAGGTTTGCTTAGGTGCAGTAAGAGCTGTAGACTTAGATGGACTAATTATCTGCGGCCTGGTATCAGAAGAGGTAATTTCACGGATCAGGAGGAGAAAATGATCATTCACCTTCAAGCTCTTCTAGGCAACAGATGGGCTGCCATAGCCTCCTACCTACCACAGAGAACAGACAACGATATCAAGAATTATTGGAACACCCATTTGAAGAAGAAACTGCAAAAGCTACAAACTGGGAAGGAGTGTCATGACCAAGATGGATTCTCAACTTCACAGTCAAAGGGTCAGTGGGAGAGAAAGCTTCAGACAGATATTCACATGGCAAAGCAAGCCTTGCGTGAGGCTTTGTCACTTGACAAAACAAGTGATCCCTCTAACACAACCCCGATACCGTATCAACCATCCCCACCACCACCTCCATCATCTTCATCATCATATGCTTCAAGTGCAGAAAACATAGCACGATTGCTGGAGAACTGGATGAAGAAGCAGCCTCAGAAACCAGCTCAATCAAACTCAAATCACACACAGAATTCGTACACCACCTTTGGTACCACTGCAGCTTCGGCCAGTCCTAGTGAAGTGATTCAAAGTGCTATGGCTACCACACCCGATGGTTTTGACACTTTCTGGAGCTTCAACTCTTCAAAATCTGATGTCTCTCAATCTGGATCGGCAGATGACACTCCCATGTCGATACCTGACCAGTCTGGCGTCCTCCAAGTTGAAAGTAAGCCAAATTTGGAGGCTGCACCTGTCCCTCTCACATTATTAGAGAAATGGCTTCTGGATGACTGTGCAGTTGCTCTAGGCCGTGATGATCTGATAAACATGTCACTGGTAGAAAACTCAACAGGGTTGCTCTAG 999 0.4585 MGRPPCCDKLAGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIRRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLQKLQTGKECHDQDGFSTSQSKGQWERKLQTDIHMAKQALREALSLDKTSDPSNTTPIPYQPSPPPPPSSSSSYASSAENIARLLENWMKKQPQKPAQSNSNHTQNSYTTFGTTAASASPSEVIQSAMATTPDGFDTFWSFNSSKSDVSQSGSADDTPMSIPDQSGVLQVESKPNLEAAPVPLTLLEKWLLDDCAVALGRDDLINMSLVENSTGLL* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00910 332 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Pte10g00910 332 MobiDBLite consensus disorder prediction 207 229 - -
Pte10g00910 332 FunFam Transcription factor MYB30 69 127 - -
Pte10g00910 332 SMART sant 67 115 IPR001005 -
Pte10g00910 332 SMART sant 14 64 IPR001005 -
Pte10g00910 332 MobiDBLite consensus disorder prediction 122 143 - -
Pte10g00910 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 237 - -
Pte10g00910 332 MobiDBLite consensus disorder prediction 173 187 - -
Pte10g00910 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Pte10g00910 332 MobiDBLite consensus disorder prediction 127 142 - -
Pte10g00910 332 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Pte10g00910 332 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Pte10g00910 332 Gene3D - 70 158 - -
Pte10g00910 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Pte10g00910 332 MobiDBLite consensus disorder prediction 208 229 - -
Pte10g00910 332 MobiDBLite consensus disorder prediction 162 192 - -
Pte10g00910 332 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Pte10g00910 332 FunFam MYB-related transcription factor 14 67 - -
Pte10g00910 332 CDD SANT 70 113 IPR001005 -
Pte10g00910 332 Gene3D - 14 67 - -
Pte10g00910 332 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pte10g00910 332 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00910 Pte-Chr10 21266442 21268385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00910 1 325 MYB Transcription Factor Family AT5G62470 50.402 1.14e-102 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte10g00910 Myb_DNA-binding 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00910 K09422 - zju:107407717 427.557