Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00898 ATGATGGAAGGAAAGGACAGTAAACGTCGTGGTTTTGTGTCACAAGGGCCTCCTCCTGGTCTCTTTGTCCGCTTGGAGAATTCAGACGATCTATATCTGAAGAAGAAATATAATATGCGCCGCTGGCTTTGCTGTGCTTGTCATGTGGAAGAGTCCTACCCTTCGCATGAAAATGAAAACTTGAAAAGCTCACCTAATCGTGTAGAAGGAAACTATAAAGGCTCTAAAGCTTCAGCTCCTATCAAACCTGATGTGCAAAAGGCACCACCTCCTATAGAAGTGCCTGCATTATCTTTAGATGAACTTAAGGAAAAGACTGATAACTTTGGGTCTAAGGCCTTGATTGGTGAAGGATCATATGGAAGAGTGTATTATGCAATCTTGAATAATGGCAAAACTGTGGCAGTCAAAAAGCTTGATGCTTCAAATGAGCCTGAACCAAATAACGATCTCTTGTCTCAGGTTTCCACTGTCTCAAGGCTGAAGAATGAAAATTTTGTTGAGTTGCTTGGCTACTGTGTTGAAGGGAATCTGCGTGTGCTTGCGTATGAGTTTGCAACCATGGGATCTCTACATGACATATTGCACGGTAGAAAGGGGGTTCAAGGGGCACAGCCAGGGCCAGTCCTTAACTGGATGACACGGGTTAGGATTGCAGTTGATGCAGCCAGAGGTTTGGAGTATTTGCACGAGAAAGTTCAGCCAGCTATAATTCACAGAGATATCAGATCAAGCAATGTTCTTATCTATGAAGACTTCAAGGCCAAAATAGCTGATTTTAACCTCTCAAATCAGGCTCCTGACATGGCTGCACGCCTACATTCAACCAGAGTGTTGGGAACTTTTGGATATCATGCTCCAGAGTATGCAATGACTGGACAGCTGACTCAAAAAAGTGATGTTTACAGTTTTGGTGTTGTTCTTCTTGAGCTTCTCACTGGAAGGAAACCTGTTGATCATACCATGCCTCGTGGACAACAGAGTCTTGTTACATGGGCCACCCCAAGATTGAGTGAGGACAAAGTGAAGCAGTGCGTGGATCCGAAACTGAAAGGTGAATACCCTCCAAAAGGAGTTGCTAAGCTTGCAGCAGTGGCTGCATTGTGTGTGCAGTATGAAGCTGAGTTCAGGCCTAATATGAGTATTGTTGTTAAAGCACTCCAACCCCTTTTGAAATCTTCTGCGCCTCCACCAGAATCTTGA 1203 0.4414 MMEGKDSKRRGFVSQGPPPGLFVRLENSDDLYLKKKYNMRRWLCCACHVEESYPSHENENLKSSPNRVEGNYKGSKASAPIKPDVQKAPPPIEVPALSLDELKEKTDNFGSKALIGEGSYGRVYYAILNNGKTVAVKKLDASNEPEPNNDLLSQVSTVSRLKNENFVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLNWMTRVRIAVDAARGLEYLHEKVQPAIIHRDIRSSNVLIYEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKSSAPPPES* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00898 400 FunFam PTI1-like tyrosine-protein kinase 3 71 185 - -
Pte10g00898 400 Pfam Protein tyrosine and serine/threonine kinase 114 387 IPR001245 GO:0004672|GO:0006468
Pte10g00898 400 MobiDBLite consensus disorder prediction 55 90 - -
Pte10g00898 400 SMART tyrkin_6 109 387 IPR020635 GO:0004713|GO:0006468
Pte10g00898 400 Gene3D Phosphorylase Kinase; domain 1 80 185 - -
Pte10g00898 400 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 42 394 - -
Pte10g00898 400 ProSitePatterns Tyrosine protein kinases specific active-site signature. 237 249 IPR008266 GO:0004672|GO:0006468
Pte10g00898 400 Gene3D Transferase(Phosphotransferase) domain 1 187 396 - -
Pte10g00898 400 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Pte10g00898 400 ProSiteProfiles Protein kinase domain profile. 109 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00898 400 SUPERFAMILY Protein kinase-like (PK-like) 88 387 IPR011009 -
Pte10g00898 400 FunFam PTI1-like tyrosine-protein kinase 3 187 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00898 Pte-Chr10 18246236 18250151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00898 43 388 Receptor kinase-like Gene Family AT4G02010 45.272 8.87e-91 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pte10g00898 PK_Tyr_Ser-Thr 6.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00898 K13436 - mnt:21407434 673.7