Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00893 ATGTGCTTATTTTCCGATATGGGTGTTTTCTTGGTGATCATCATTGCTGTTGGGATTTCCTTTCAGGCTCTAGCTCTGGATTCTCGGAACTTGACATGTGACTCAAATGATCTCAAGGCACTGCAGGAGTTTCTAGGCAGTTTGGAATCGAAGATCGATGGATGGGACGCCAATTCTTCATCTGACTGCTGTGAATGGCCAGGCATCACTTGCAACTCTGGTAGAGTTGTGAAGTTGGAGCTTGGTAAAGGCAAACTGATAGGCAGGTTATCTCCGTCTATAGGAAGCTTTTATAAGCTGACGACTCTCAATCTCACTCACAACATGCTCAAAGGTTCTCTTCCTATTTCAATGTTTGCTTTGCGTTATTTGGGGATTCTAGATTTGAGCTCCAATCGGCTTGCTGGATCATTACCTAGTTCTATTGATCTCCCTGCATTAAAGTATCTTGACATTTCTCAAAATTTATTCAATGTATCTTTTCCTGTTGGTATATGCGAGAATTCTACTAGCATCAGTGTGCTTAATGTTGCTGAGAATCAATTCGTTGGGGATATCCCACCAGGACTTGGGAATTGTAATTCGTTGCAGGTTCTATCTCTTTCTACGAATGGATTTACTGGTGGTATATCTGAAGAGATTTTTAAGCTGCAGAATTTGACCCAATTGCGTTTGCAGGGTAATAACCTTTCTGGTCCACTTAGCAAAGGGATTGCCAGGCTCACTGGCCTTGTTCATTTTGATATATCCTCTAACCAATTTACAGAAGAAATCCCTGATGTCTTTTATGAATTTGAAAAGCTACAAGATTTTGTGGCACACTCGAACAAATTCACAGGTGGCATACCTTCCTCCTTGACTAATTCCATGACTCTTTCTTTGCTTAATTTGAGGAACAATTCTTTCGAGGGTCATATTGAACTGAACTGTTCTGCAATGACTAGTTTGACGTGTCTCGATCTAGGCTCCAATCGGTTCATTGGTCCTATTCCTGAAAATCTTCCTTCTTGTCTAAGATTGAATACTGTTAATCTAGCTCGGAACAACTTCAGCGGTCAAATACCAGAAAGTTTCAATAATTTTTACAGTCTATCTCACCTTTCACTCTCGAAAGCCAGCCTTTATAATCTCTCATCTGCTCTTAAAACTTTGCAATGGTGCAGGAACCTCTCTACATTGATACTCACCCTGAATTTTCAGAATGAAGTATTGCCTGCTGATCCTTCTTTGCATTTTGAGAATTTGAAAGTTCTCGTTATTGCTAATTGTCAATTGACAGGTTCAATACCTCCTTGGTTGGGTAGCAGTGGCAATTTGCAGTTACTAGATTTATCATGGAACCGCCTGGAAGGCAGAATCCCACCATGGTTTGGCTCGTTTGTGTCCCTCTTCTATGTTGACTTATCAAATAACTCATTTACAGGGGAAATCCCCAAAAGCATTGCTCAGTTACCAAGTCTTATGAACCGGAATATATCATTGGGGGAACCTTCGCCTGAGTTCCCCTTATTCTCGAAAAAGAATGCAAGCTACAAAGGGTTGCAGTATAATCAGGTCTTAAGTTTTCCATCAACTCTAGAGCTCAGCTATAATAATCTCACTGGACCAATTTGGCCTGAATTTTGGAGACTTGAAATGCTATTTGTCTTGGATTTGAAATTTAATCATCTATCTGGGCCAATTCCAAGTACCTTATCAGGGATGGCAAGTTTGGAAGTGCTGGACTTATCACATAATGATCTTTCAGGGCAAATACCAAATTCATTGGAGAATCTCAGCTTCCTGTCAACATTCAGTGTTGCGTATAATCATTTATATGGGTCAATACCTGCCAAAGGTCAGTTTCTGACTTTCCCCAACTCCAGCTTTGAAGGAAATGATCTTTGTGGTGATCATATACTTTCTTGCTTGCCAATTATCCGGTTCCCCACAAACTCAAGCACAAAATCAAGAAGGAGTCGAGCTACTGTTATTGGAATGGCTATTGGGATTGTCTTTGGAGTTTTTTCCCTTCTCCTCATGCTCGTGATACTGTTACTGGGAAAAGTCCGCAGTGAGATTGATCCTGAAAAAGAAGAACCTGAGGGTAGAAATGAAGAGGCAGAAGAGTCTGAGTCAAGATTAGTTGTTATATTCCAGACCAAGGAGAACAATAAGGTGCTGTGCCTGGAAGACCTGTTGAAATCTACTAACCACTTTGATCAAGCCAATATTGTTGGTTGTGGGGGTTTCGGTCTGGTTTACAAAGCCATTCTGCCTGATGGGAGGAAGGTCGCAATCAAAAGGCTCTGTGGTGATTATCAGATGGATAGAGAGTTCCAGGCTGAAGTCGAAGCACTATCAAGAGCTCAGCATCCAAATTTAGTCTATCTTCAAGGTTATTGTACGTACAAAAATGACAGGCTATTAATATATTCATACATGGAGAATAGTAGTCTAGATTATTGGTTACATGAAAAACTTGACGGTCCAGTCTCCCTAGATTGGGACAAAAGACTCCAAATTGCTCAAGGTACTGCAAGGGGCCTTGCTTATTTGCATCAATCATGTGAACCCCATATTCTTCATCGTGATATAAAATCAAGTAATATTCTTCTGGATGAGAACTTCAAAGCACATTTAGCTGATTTTGGTCTTGCAAGACTTATGTTGCCCTACGATACTCATGTAACAACAGATCTTGTGGGAACTCTAGGATATATTCCTCCTGAATATGGCCAAGCCCCTGTGGCCACTTACAAAGGAGATGTGTACAGTTTTGGGGTTGTCTTGCTGGAACTTGTCACAGGTAAAAGGCCTATGGATATCTGCAAGCCGAAAGGATCACGGGACCTAATCTCCTGGGTGCTGCAAAAGAAGAATGAAAACCAGGAAACTGAAGTTTTCGATCCATTAGTTTATGACAAGCAAAATGGTAGGGAAATGTATAGAGTTTTAGAAATTGCTTGTCTTTGCTTAAGTGAGTCCCCCAAAGTGCGTCCTTCAATTCAGCAAATAGTTTCTTGGCTTGACAACATCAAAGCCAACATGTAG 3033 0.4085 MCLFSDMGVFLVIIIAVGISFQALALDSRNLTCDSNDLKALQEFLGSLESKIDGWDANSSSDCCEWPGITCNSGRVVKLELGKGKLIGRLSPSIGSFYKLTTLNLTHNMLKGSLPISMFALRYLGILDLSSNRLAGSLPSSIDLPALKYLDISQNLFNVSFPVGICENSTSISVLNVAENQFVGDIPPGLGNCNSLQVLSLSTNGFTGGISEEIFKLQNLTQLRLQGNNLSGPLSKGIARLTGLVHFDISSNQFTEEIPDVFYEFEKLQDFVAHSNKFTGGIPSSLTNSMTLSLLNLRNNSFEGHIELNCSAMTSLTCLDLGSNRFIGPIPENLPSCLRLNTVNLARNNFSGQIPESFNNFYSLSHLSLSKASLYNLSSALKTLQWCRNLSTLILTLNFQNEVLPADPSLHFENLKVLVIANCQLTGSIPPWLGSSGNLQLLDLSWNRLEGRIPPWFGSFVSLFYVDLSNNSFTGEIPKSIAQLPSLMNRNISLGEPSPEFPLFSKKNASYKGLQYNQVLSFPSTLELSYNNLTGPIWPEFWRLEMLFVLDLKFNHLSGPIPSTLSGMASLEVLDLSHNDLSGQIPNSLENLSFLSTFSVAYNHLYGSIPAKGQFLTFPNSSFEGNDLCGDHILSCLPIIRFPTNSSTKSRRSRATVIGMAIGIVFGVFSLLLMLVILLLGKVRSEIDPEKEEPEGRNEEAEESESRLVVIFQTKENNKVLCLEDLLKSTNHFDQANIVGCGGFGLVYKAILPDGRKVAIKRLCGDYQMDREFQAEVEALSRAQHPNLVYLQGYCTYKNDRLLIYSYMENSSLDYWLHEKLDGPVSLDWDKRLQIAQGTARGLAYLHQSCEPHILHRDIKSSNILLDENFKAHLADFGLARLMLPYDTHVTTDLVGTLGYIPPEYGQAPVATYKGDVYSFGVVLLELVTGKRPMDICKPKGSRDLISWVLQKKNENQETEVFDPLVYDKQNGREMYRVLEIACLCLSESPKVRPSIQQIVSWLDNIKANM* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00893 1010 SUPERFAMILY L domain-like 427 631 - -
Pte10g00893 1010 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Pte10g00893 1010 Gene3D Ribonuclease Inhibitor 337 638 IPR032675 -
Pte10g00893 1010 Gene3D Ribonuclease Inhibitor 34 143 IPR032675 -
Pte10g00893 1010 SUPERFAMILY L domain-like 30 233 - -
Pte10g00893 1010 Gene3D Transferase(Phosphotransferase) domain 1 808 1010 - -
Pte10g00893 1010 SMART LRR_typ_2 437 459 IPR003591 -
Pte10g00893 1010 SMART LRR_typ_2 568 592 IPR003591 -
Pte10g00893 1010 SMART LRR_typ_2 144 168 IPR003591 -
Pte10g00893 1010 SMART LRR_typ_2 217 241 IPR003591 -
Pte10g00893 1010 SMART LRR_typ_2 97 121 IPR003591 -
Pte10g00893 1010 SMART LRR_typ_2 313 337 IPR003591 -
Pte10g00893 1010 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 267 1005 - -
Pte10g00893 1010 ProSiteProfiles Protein kinase domain profile. 733 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00893 1010 PRINTS Leucine-rich repeat signature 124 137 - -
Pte10g00893 1010 PRINTS Leucine-rich repeat signature 568 581 - -
Pte10g00893 1010 FunFam Nuclear pore complex protein NUP107 34 188 - -
Pte10g00893 1010 SUPERFAMILY L domain-like 166 502 - -
Pte10g00893 1010 ProSiteProfiles Leucine-rich repeat profile. 570 593 IPR001611 GO:0005515
Pte10g00893 1010 Gene3D Ribonuclease Inhibitor 237 336 IPR032675 -
Pte10g00893 1010 FunFam Leucine-rich repeat receptor protein kinase MSP1 695 807 - -
Pte10g00893 1010 Gene3D Ribonuclease Inhibitor 144 236 IPR032675 -
Pte10g00893 1010 FunFam Tyrosine-sulfated glycopeptide receptor 1 310 639 - -
Pte10g00893 1010 SUPERFAMILY Protein kinase-like (PK-like) 713 1003 IPR011009 -
Pte10g00893 1010 Gene3D Phosphorylase Kinase; domain 1 695 807 - -
Pte10g00893 1010 FunFam Leucine-rich repeat receptor-like protein kinase 808 1010 - -
Pte10g00893 1010 ProSitePatterns Protein kinases ATP-binding region signature. 739 761 IPR017441 GO:0005524
Pte10g00893 1010 SMART serkin_6 733 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00893 1010 Pfam Protein kinase domain 735 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00893 1010 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 211 306 - -
Pte10g00893 1010 Pfam Leucine Rich Repeat 438 459 IPR001611 GO:0005515
Pte10g00893 1010 Pfam Leucine Rich Repeat 570 592 IPR001611 GO:0005515
Pte10g00893 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 854 866 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00893 Pte-Chr10 17013495 17017663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00893 64 633 Receptor kinase-like Gene Family AT5G07280 33.441 4.13e-63 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pte10g00893 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00893 - - tcc:18610062 1311.59