Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte10g00893 | ATGTGCTTATTTTCCGATATGGGTGTTTTCTTGGTGATCATCATTGCTGTTGGGATTTCCTTTCAGGCTCTAGCTCTGGATTCTCGGAACTTGACATGTGACTCAAATGATCTCAAGGCACTGCAGGAGTTTCTAGGCAGTTTGGAATCGAAGATCGATGGATGGGACGCCAATTCTTCATCTGACTGCTGTGAATGGCCAGGCATCACTTGCAACTCTGGTAGAGTTGTGAAGTTGGAGCTTGGTAAAGGCAAACTGATAGGCAGGTTATCTCCGTCTATAGGAAGCTTTTATAAGCTGACGACTCTCAATCTCACTCACAACATGCTCAAAGGTTCTCTTCCTATTTCAATGTTTGCTTTGCGTTATTTGGGGATTCTAGATTTGAGCTCCAATCGGCTTGCTGGATCATTACCTAGTTCTATTGATCTCCCTGCATTAAAGTATCTTGACATTTCTCAAAATTTATTCAATGTATCTTTTCCTGTTGGTATATGCGAGAATTCTACTAGCATCAGTGTGCTTAATGTTGCTGAGAATCAATTCGTTGGGGATATCCCACCAGGACTTGGGAATTGTAATTCGTTGCAGGTTCTATCTCTTTCTACGAATGGATTTACTGGTGGTATATCTGAAGAGATTTTTAAGCTGCAGAATTTGACCCAATTGCGTTTGCAGGGTAATAACCTTTCTGGTCCACTTAGCAAAGGGATTGCCAGGCTCACTGGCCTTGTTCATTTTGATATATCCTCTAACCAATTTACAGAAGAAATCCCTGATGTCTTTTATGAATTTGAAAAGCTACAAGATTTTGTGGCACACTCGAACAAATTCACAGGTGGCATACCTTCCTCCTTGACTAATTCCATGACTCTTTCTTTGCTTAATTTGAGGAACAATTCTTTCGAGGGTCATATTGAACTGAACTGTTCTGCAATGACTAGTTTGACGTGTCTCGATCTAGGCTCCAATCGGTTCATTGGTCCTATTCCTGAAAATCTTCCTTCTTGTCTAAGATTGAATACTGTTAATCTAGCTCGGAACAACTTCAGCGGTCAAATACCAGAAAGTTTCAATAATTTTTACAGTCTATCTCACCTTTCACTCTCGAAAGCCAGCCTTTATAATCTCTCATCTGCTCTTAAAACTTTGCAATGGTGCAGGAACCTCTCTACATTGATACTCACCCTGAATTTTCAGAATGAAGTATTGCCTGCTGATCCTTCTTTGCATTTTGAGAATTTGAAAGTTCTCGTTATTGCTAATTGTCAATTGACAGGTTCAATACCTCCTTGGTTGGGTAGCAGTGGCAATTTGCAGTTACTAGATTTATCATGGAACCGCCTGGAAGGCAGAATCCCACCATGGTTTGGCTCGTTTGTGTCCCTCTTCTATGTTGACTTATCAAATAACTCATTTACAGGGGAAATCCCCAAAAGCATTGCTCAGTTACCAAGTCTTATGAACCGGAATATATCATTGGGGGAACCTTCGCCTGAGTTCCCCTTATTCTCGAAAAAGAATGCAAGCTACAAAGGGTTGCAGTATAATCAGGTCTTAAGTTTTCCATCAACTCTAGAGCTCAGCTATAATAATCTCACTGGACCAATTTGGCCTGAATTTTGGAGACTTGAAATGCTATTTGTCTTGGATTTGAAATTTAATCATCTATCTGGGCCAATTCCAAGTACCTTATCAGGGATGGCAAGTTTGGAAGTGCTGGACTTATCACATAATGATCTTTCAGGGCAAATACCAAATTCATTGGAGAATCTCAGCTTCCTGTCAACATTCAGTGTTGCGTATAATCATTTATATGGGTCAATACCTGCCAAAGGTCAGTTTCTGACTTTCCCCAACTCCAGCTTTGAAGGAAATGATCTTTGTGGTGATCATATACTTTCTTGCTTGCCAATTATCCGGTTCCCCACAAACTCAAGCACAAAATCAAGAAGGAGTCGAGCTACTGTTATTGGAATGGCTATTGGGATTGTCTTTGGAGTTTTTTCCCTTCTCCTCATGCTCGTGATACTGTTACTGGGAAAAGTCCGCAGTGAGATTGATCCTGAAAAAGAAGAACCTGAGGGTAGAAATGAAGAGGCAGAAGAGTCTGAGTCAAGATTAGTTGTTATATTCCAGACCAAGGAGAACAATAAGGTGCTGTGCCTGGAAGACCTGTTGAAATCTACTAACCACTTTGATCAAGCCAATATTGTTGGTTGTGGGGGTTTCGGTCTGGTTTACAAAGCCATTCTGCCTGATGGGAGGAAGGTCGCAATCAAAAGGCTCTGTGGTGATTATCAGATGGATAGAGAGTTCCAGGCTGAAGTCGAAGCACTATCAAGAGCTCAGCATCCAAATTTAGTCTATCTTCAAGGTTATTGTACGTACAAAAATGACAGGCTATTAATATATTCATACATGGAGAATAGTAGTCTAGATTATTGGTTACATGAAAAACTTGACGGTCCAGTCTCCCTAGATTGGGACAAAAGACTCCAAATTGCTCAAGGTACTGCAAGGGGCCTTGCTTATTTGCATCAATCATGTGAACCCCATATTCTTCATCGTGATATAAAATCAAGTAATATTCTTCTGGATGAGAACTTCAAAGCACATTTAGCTGATTTTGGTCTTGCAAGACTTATGTTGCCCTACGATACTCATGTAACAACAGATCTTGTGGGAACTCTAGGATATATTCCTCCTGAATATGGCCAAGCCCCTGTGGCCACTTACAAAGGAGATGTGTACAGTTTTGGGGTTGTCTTGCTGGAACTTGTCACAGGTAAAAGGCCTATGGATATCTGCAAGCCGAAAGGATCACGGGACCTAATCTCCTGGGTGCTGCAAAAGAAGAATGAAAACCAGGAAACTGAAGTTTTCGATCCATTAGTTTATGACAAGCAAAATGGTAGGGAAATGTATAGAGTTTTAGAAATTGCTTGTCTTTGCTTAAGTGAGTCCCCCAAAGTGCGTCCTTCAATTCAGCAAATAGTTTCTTGGCTTGACAACATCAAAGCCAACATGTAG | 3033 | 0.4085 | MCLFSDMGVFLVIIIAVGISFQALALDSRNLTCDSNDLKALQEFLGSLESKIDGWDANSSSDCCEWPGITCNSGRVVKLELGKGKLIGRLSPSIGSFYKLTTLNLTHNMLKGSLPISMFALRYLGILDLSSNRLAGSLPSSIDLPALKYLDISQNLFNVSFPVGICENSTSISVLNVAENQFVGDIPPGLGNCNSLQVLSLSTNGFTGGISEEIFKLQNLTQLRLQGNNLSGPLSKGIARLTGLVHFDISSNQFTEEIPDVFYEFEKLQDFVAHSNKFTGGIPSSLTNSMTLSLLNLRNNSFEGHIELNCSAMTSLTCLDLGSNRFIGPIPENLPSCLRLNTVNLARNNFSGQIPESFNNFYSLSHLSLSKASLYNLSSALKTLQWCRNLSTLILTLNFQNEVLPADPSLHFENLKVLVIANCQLTGSIPPWLGSSGNLQLLDLSWNRLEGRIPPWFGSFVSLFYVDLSNNSFTGEIPKSIAQLPSLMNRNISLGEPSPEFPLFSKKNASYKGLQYNQVLSFPSTLELSYNNLTGPIWPEFWRLEMLFVLDLKFNHLSGPIPSTLSGMASLEVLDLSHNDLSGQIPNSLENLSFLSTFSVAYNHLYGSIPAKGQFLTFPNSSFEGNDLCGDHILSCLPIIRFPTNSSTKSRRSRATVIGMAIGIVFGVFSLLLMLVILLLGKVRSEIDPEKEEPEGRNEEAEESESRLVVIFQTKENNKVLCLEDLLKSTNHFDQANIVGCGGFGLVYKAILPDGRKVAIKRLCGDYQMDREFQAEVEALSRAQHPNLVYLQGYCTYKNDRLLIYSYMENSSLDYWLHEKLDGPVSLDWDKRLQIAQGTARGLAYLHQSCEPHILHRDIKSSNILLDENFKAHLADFGLARLMLPYDTHVTTDLVGTLGYIPPEYGQAPVATYKGDVYSFGVVLLELVTGKRPMDICKPKGSRDLISWVLQKKNENQETEVFDPLVYDKQNGREMYRVLEIACLCLSESPKVRPSIQQIVSWLDNIKANM* | 1011 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte10g00893 | 1010 | SUPERFAMILY | L domain-like | 427 | 631 | - | - | |
Pte10g00893 | 1010 | Pfam | Leucine rich repeat N-terminal domain | 35 | 72 | IPR013210 | - | |
Pte10g00893 | 1010 | Gene3D | Ribonuclease Inhibitor | 337 | 638 | IPR032675 | - | |
Pte10g00893 | 1010 | Gene3D | Ribonuclease Inhibitor | 34 | 143 | IPR032675 | - | |
Pte10g00893 | 1010 | SUPERFAMILY | L domain-like | 30 | 233 | - | - | |
Pte10g00893 | 1010 | Gene3D | Transferase(Phosphotransferase) domain 1 | 808 | 1010 | - | - | |
Pte10g00893 | 1010 | SMART | LRR_typ_2 | 437 | 459 | IPR003591 | - | |
Pte10g00893 | 1010 | SMART | LRR_typ_2 | 568 | 592 | IPR003591 | - | |
Pte10g00893 | 1010 | SMART | LRR_typ_2 | 144 | 168 | IPR003591 | - | |
Pte10g00893 | 1010 | SMART | LRR_typ_2 | 217 | 241 | IPR003591 | - | |
Pte10g00893 | 1010 | SMART | LRR_typ_2 | 97 | 121 | IPR003591 | - | |
Pte10g00893 | 1010 | SMART | LRR_typ_2 | 313 | 337 | IPR003591 | - | |
Pte10g00893 | 1010 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 267 | 1005 | - | - | |
Pte10g00893 | 1010 | ProSiteProfiles | Protein kinase domain profile. | 733 | 1003 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte10g00893 | 1010 | PRINTS | Leucine-rich repeat signature | 124 | 137 | - | - | |
Pte10g00893 | 1010 | PRINTS | Leucine-rich repeat signature | 568 | 581 | - | - | |
Pte10g00893 | 1010 | FunFam | Nuclear pore complex protein NUP107 | 34 | 188 | - | - | |
Pte10g00893 | 1010 | SUPERFAMILY | L domain-like | 166 | 502 | - | - | |
Pte10g00893 | 1010 | ProSiteProfiles | Leucine-rich repeat profile. | 570 | 593 | IPR001611 | GO:0005515 | |
Pte10g00893 | 1010 | Gene3D | Ribonuclease Inhibitor | 237 | 336 | IPR032675 | - | |
Pte10g00893 | 1010 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 695 | 807 | - | - | |
Pte10g00893 | 1010 | Gene3D | Ribonuclease Inhibitor | 144 | 236 | IPR032675 | - | |
Pte10g00893 | 1010 | FunFam | Tyrosine-sulfated glycopeptide receptor 1 | 310 | 639 | - | - | |
Pte10g00893 | 1010 | SUPERFAMILY | Protein kinase-like (PK-like) | 713 | 1003 | IPR011009 | - | |
Pte10g00893 | 1010 | Gene3D | Phosphorylase Kinase; domain 1 | 695 | 807 | - | - | |
Pte10g00893 | 1010 | FunFam | Leucine-rich repeat receptor-like protein kinase | 808 | 1010 | - | - | |
Pte10g00893 | 1010 | ProSitePatterns | Protein kinases ATP-binding region signature. | 739 | 761 | IPR017441 | GO:0005524 | |
Pte10g00893 | 1010 | SMART | serkin_6 | 733 | 1003 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte10g00893 | 1010 | Pfam | Protein kinase domain | 735 | 1001 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte10g00893 | 1010 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 211 | 306 | - | - | |
Pte10g00893 | 1010 | Pfam | Leucine Rich Repeat | 438 | 459 | IPR001611 | GO:0005515 | |
Pte10g00893 | 1010 | Pfam | Leucine Rich Repeat | 570 | 592 | IPR001611 | GO:0005515 | |
Pte10g00893 | 1010 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 854 | 866 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte10g00893 | Pte-Chr10 | 17013495 | 17017663 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte10g00893 | 64 | 633 | Receptor kinase-like Gene Family | AT5G07280 | 33.441 | 4.13e-63 | 231 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-1 | Pte10g00893 | Pkinase | 1.4e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte10g00893 | - | - | tcc:18610062 | 1311.59 |