Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00879 ATGGGCAACAAGATTGCTCGCACAACACAAGTCTCTGCTTCGGAGTATTACCTCCATGACTTACCTTCAACATACAACCTCGTCTTGAAGGAGGTTCTAGGTCGAGGTCGTTTCTTCAAGTCGATTTTGTGTAAGCATGATGAGGGTCTGGTTCTTGTCAAGGTCTACTTCAAGCGTGGCGATTTTATCGATCTTAGAGAGTACGAAAGAAGATTGTCTCAGATTAAAGAAATTTTTGTTAGCATTGATCACCCTCACGTTTGGCCTTTCCAGTTTTGGCAAGAAACAGATAAAGCAGCCTACTTGTTGAGACAATATTTCTTCCATAATTTGCACGATCGCTTAAGTACAAGACCATTTCTAAGCACCATTGAGAAGAAATGGTTGGCATTTCAGTTACTTCTTGCTGTTAAACAGAGCCATGAGAAGGGGGTGTGCCATGGTGATATAAAGTGCGAAAATGTGCTGATCACTTCTTGGAATTGGCTTTACCTTGCTGACTTTGCATCTTTTAAACCTACTTACATTCCCTATGACGATCCATCAGATTTCTCTTTTTTCTTTGACACCGGAGGAAGAAGGCTCTGTTATCTTGCACCAGAGAGATTCTATGAGCATGGAGGCGAGATGCAGGTGGCACAAGATGCTCCTTTGAGACCATCCATGGATATCTTTGCAGTCGGGTGTGTGATAGCTGAGCTTTTCCTCGAGGGTCAGCCATTGTTTGAGTTCTCCCAGCTTCTTGCTTACCGTAGAGGACAGTATGATCCTACCCAATATCTCGAGAAAATCCCAGATCCTGGAATTCGCAAAATGATACTGCACATGATACAACTGGAACCTGAGTCCCGGCTTTCGGCTGAAAGCTACCTGCAGGAATATAAAGCAGTTGTATTCCCAACTTATTTCTCAACAATTCTTCATAATTTCTACTGCTGCTGGAATCCTCTTCATTCTGATATGAGGGTGGTGTTATGTGAGAATGCTTTTGAAAGAATTCTCAAACAAATGATGAATTGTATGGCCACTGAGGAGAAAGGTACTGGACAATCTACAAATTTGAAGAACAGTTCTGGTGAAGTGCTTGAAAATATTACTGCAAAAGAAGATACAGTATTCAAAAAAGAATCTTTGAAGAACAGAGACTACTCGGGTAATGCTTTAGTTAATGATCATTTTGAACTTCTTAGTGATATAAGGTCACTTCTTGGTGATGACACGCAAAGTAATAATTCTTCTAGCCCCAAGCCTCTGTTGGAATCCACAGCAAATACTACGTTTTCCAAAACTATTAGGAATTCACAATCGTCCAGTGAGCTGCTTCAGAAAATTGCTAATGCATTTCAGGGAAATGATCATCCCTTTTTGAAAAAAGTTACAGTAAATGATTTGAATACATTGATGTCCGAGTATGATGGTCAATCAGATACGTTTGGCCTTCCTTTCTTGCCATTACCCAGAGAGAGTATGATATGTGAAGGTATGGTTCTGATTGCTTCTCTGCTTTGTTCCTGCATACGAAATGTAAAGTTACCTCATCTGAGGAGGGCTGCTGTGATGTTATTAAAGGCTTCTGCATTATTTATTGATGATGAAAATCGCCTTCAACGAGTGATTCCATATGTGGTTGCAATGCTTGTGGATTCAGCAGCAATTGTACGTTGTGCTGCCTTGGAGACACTTTCTGACATTCTGCCATTGATCAGAGATTTTCCTCCAAGTGATGCAAAGATCTTCCCCGAGTATATTCTTCCAATGCTTTCTGCCCTTCCTGATGATCCGGAGGAAAGTGTTAGAATTTGTTATACCAGCAATATAGCCAAGCTGGCGCTTACGGCTTATGGGTTCTTAGTTCACTCCATAAGCTTGAGTGAGGGGGGTGTCCTTGATGAGTTGAGTGCACTGCAGAAGCCTCTATCTTCATCTGCGCAGACCTCTGTGAAACTGCAAAGGGTTAGTAGTGATGCACAACTTGCGCAGCTCAGGAAGTCGATGGCAGAGGTTGTTCAAGAGCTTGTTATGGGTCCAAAGCAAACGCCAAACATCAGAAGAGCACTCCTTCATGACATTGGGAAGTTGTGCTGCTTCTTTGGCCAGAAACAAAGCAACGATCTCCTGTTGCCTATCCTCCCTGCTTTTCTAAATGACCGAGATGAACAATTAAGGGAAGTATTCTATGAGAAAATTGTGTATGTCTGCTTCTTTGTGGGCCAAAGAAGTGTTGAGGAATATCTTTTACCTTACATTGAACAGGCTCTAAGTGATACAACAGAGGCTGTCATTGTCAGAGCATTAGACTGTTTGGCCATTCTCTGCAGAAATGATTTCTTCCGAAAGCGGATACTACTTCAAATGATAAATCATGCCTTTCCATTGCTATGCTATCCCAGCCAATGGGTAAGGAGATCAGCTGTAACTTTTATTGCTTCAAGTAGTGAATGCTTAGGTGCAGTAGATTCTTATGTTTTCCTTGCTCCTGTTATACGACCTTTCCTGCGGAGACAACCTGTATCTCTGGCTTCAGAGAAAGCTCTGCTCTCATGTTTAAAACCACCAGTCTCAAGGCAGGTCTTTTATGAAGTCTTGCAGAACTCAAATAGTTCAGATATGCTCGACAGACAGAGAAAGATATGGTATGGTTCATCTCCAGTATCTAAAGTGTGGGAAAATGCTGACTTACTAAAAAAGGACGACCTCGGTATGAAAAAAAACAAGGCCTGGCCTGACAATCGGCAGGATCCAGAGTTGCAAAAATCTGTCAGTGCTGCTTTGCAGCATCTAGATATTGACAGTGGACAAGGTGTGGGAAACTTGAGAGATGTTGGAAGTATTGTGCCTAATGACAGTTTTACTGCTGAAACTTGTGATTCCCGAGCCCGGGAAAAGTTGCGATTCTCTGGATTCGTTTCAACACCAATTGTTGGTGCTAGTAGTTTCATGTATGATAAATCATCAGAAGGCATTCGTCTGTACTCCTTTAGCATGGATAGGCGGGCTATGGGGATTCCTCCTACGACATCTGATTCTCCTTTACAGATGAATTCCCTTGGAATTAGTTCGTCCTCCATGCCATGGGTCAACCCTGTAAATAAATCATTGAATTTGAGTAGTTCAGTCCCTGCACCTAAGCTTGTCTCAGGCTCTTACAGCATTGGCAATGGTTCTAAACAATTTTACAGAGTAGTGCATGAACCAGAACTCCGGGAAAGTGACCAAACAGGTTACATAGATAAATGTCAAGATCTGGGATCATCCGACATAGTAAAAGGAAACTCTAGTGCACTTGAAGATGCCTCCAGACCAACCGATCTAACAGGATTGCTCTCTTCTTCAAGAACAATGGTACCTGATTCTGGTTGGCGACCCCGTGGAGTTTTGGTTGCACACCTGCAGGAGCATCGGTCAGCAGTTAATGACCTTGCTGTTTCTACAGATCACAATTTTTTCGTAAGTGCTTCTGATGATTCTACTGTAAAGGTGTGGGACTCGCGAAAACTGGAAAAAGACATCTCATTTAGGTCTAGGCTCACTTATCACCTAGATGGAAGTCGTGTTATGTGTGTTGCAATGCTTCGAGGTTCTGCTGTTCAATTGATTGTTGGAGCATGTGATGGTTCTGTCCGCAAGCTTGCCGTTGATCACATTTCTAGAGGCGTCGGAAATGTTGCTGAGAACTATTCTGAAGATGTGACAAGGAGGGACATCAATGAAGGTGCCATACTCAGCCTTTTAAACTTCCCAGCAGATAATCATAGTGTTATGTACAGCACTCAAAACTGTGGCATCCGCTTGTGGGATACAAGGGGAAATTCTGATGCCTGGACTCTGAAGTCTACTCCAGAAGAGGGTTTTATATCTTGCCTGGTATCAGACCCTTGTGGTAACTGGTTTGTGACAGGATCTTCAAGGGGCGTGCTTACTCTTTGGGATATGAGGTTCCTTATCCCAGTTAACTCATGGCAATATTCTCTCGTTTGCCCCATTGAGAAGATGTGCCTTTTTGTTCCATCTCCAAATACTCATCTGTCTACGATTGGAAGGCCCCTGGTTTATGTAGCTGCAGGTTGCAATGAGGTTTCCCTTTGGAATGCAGAGAACGGTAGCTGCCATCAGGTATTGAGGCTGGCTTATGAGAGTGACAATGACATGTCAGATCTTCCATGGGCTTTGGCCCGGCCAACAAGCAGGGCCACCCCGAAACTTGATCCCAGGAATGCCAATTCCAAGTACAAAGTAGATGAGCTCAATGAACCTCCTCCGCGCCTTCCTGGAATACGATCATTACTTCCCTTACCTGGGGGTGATCTGTTGACAGGGGGGACTGACTTGAAAATTCGTCGATGGGACTACTTCAGGCCTGAAAAGAGTTATTGTATCTGTGGACCAAACATGAAGGGAGTAGGAAACGACAATTTCTATGAAACCAAATCTAGTTACGGTGTACAAGTTGTCCAGGAGACAAAGCGTCGTCCACTTACAGCCAAGCTGACATCCAAGGAAGTTCTTGCAGCAGCTGCTACTGATTCTGCTGGTTGTCACCGAGATTCTATTCTTTCGCTAGCTTCTGTCAAGTTGAACCAAAGACTACTTCTATCCAGCTGTAGAGATGGTGCCATTAAAGTCTGGAAGTAG 4632 0.4326 MGNKIARTTQVSASEYYLHDLPSTYNLVLKEVLGRGRFFKSILCKHDEGLVLVKVYFKRGDFIDLREYERRLSQIKEIFVSIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSTIEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSWNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDAPLRPSMDIFAVGCVIAELFLEGQPLFEFSQLLAYRRGQYDPTQYLEKIPDPGIRKMILHMIQLEPESRLSAESYLQEYKAVVFPTYFSTILHNFYCCWNPLHSDMRVVLCENAFERILKQMMNCMATEEKGTGQSTNLKNSSGEVLENITAKEDTVFKKESLKNRDYSGNALVNDHFELLSDIRSLLGDDTQSNNSSSPKPLLESTANTTFSKTIRNSQSSSELLQKIANAFQGNDHPFLKKVTVNDLNTLMSEYDGQSDTFGLPFLPLPRESMICEGMVLIASLLCSCIRNVKLPHLRRAAVMLLKASALFIDDENRLQRVIPYVVAMLVDSAAIVRCAALETLSDILPLIRDFPPSDAKIFPEYILPMLSALPDDPEESVRICYTSNIAKLALTAYGFLVHSISLSEGGVLDELSALQKPLSSSAQTSVKLQRVSSDAQLAQLRKSMAEVVQELVMGPKQTPNIRRALLHDIGKLCCFFGQKQSNDLLLPILPAFLNDRDEQLREVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDTTEAVIVRALDCLAILCRNDFFRKRILLQMINHAFPLLCYPSQWVRRSAVTFIASSSECLGAVDSYVFLAPVIRPFLRRQPVSLASEKALLSCLKPPVSRQVFYEVLQNSNSSDMLDRQRKIWYGSSPVSKVWENADLLKKDDLGMKKNKAWPDNRQDPELQKSVSAALQHLDIDSGQGVGNLRDVGSIVPNDSFTAETCDSRAREKLRFSGFVSTPIVGASSFMYDKSSEGIRLYSFSMDRRAMGIPPTTSDSPLQMNSLGISSSSMPWVNPVNKSLNLSSSVPAPKLVSGSYSIGNGSKQFYRVVHEPELRESDQTGYIDKCQDLGSSDIVKGNSSALEDASRPTDLTGLLSSSRTMVPDSGWRPRGVLVAHLQEHRSAVNDLAVSTDHNFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLDGSRVMCVAMLRGSAVQLIVGACDGSVRKLAVDHISRGVGNVAENYSEDVTRRDINEGAILSLLNFPADNHSVMYSTQNCGIRLWDTRGNSDAWTLKSTPEEGFISCLVSDPCGNWFVTGSSRGVLTLWDMRFLIPVNSWQYSLVCPIEKMCLFVPSPNTHLSTIGRPLVYVAAGCNEVSLWNAENGSCHQVLRLAYESDNDMSDLPWALARPTSRATPKLDPRNANSKYKVDELNEPPPRLPGIRSLLPLPGGDLLTGGTDLKIRRWDYFRPEKSYCICGPNMKGVGNDNFYETKSSYGVQVVQETKRRPLTAKLTSKEVLAAAATDSAGCHRDSILSLASVKLNQRLLLSSCRDGAIKVWK* 1544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00879 1543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pte10g00879 1543 FunFam Protein kinase family protein / WD-40 repeat family protein 24 348 - -
Pte10g00879 1543 CDD STKc_Vps15 16 303 - -
Pte10g00879 1543 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1130 1162 - -
Pte10g00879 1543 SMART WD40_4 1415 1449 IPR001680 GO:0005515
Pte10g00879 1543 SMART WD40_4 1269 1310 IPR001680 GO:0005515
Pte10g00879 1543 SMART WD40_4 1123 1162 IPR001680 GO:0005515
Pte10g00879 1543 SMART WD40_4 1498 1543 IPR001680 GO:0005515
Pte10g00879 1543 SMART WD40_4 1171 1211 IPR001680 GO:0005515
Pte10g00879 1543 ProSiteProfiles Trp-Asp (WD) repeats profile. 1510 1543 IPR001680 GO:0005515
Pte10g00879 1543 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00879 1543 Gene3D - 676 856 IPR011989 -
Pte10g00879 1543 Gene3D - 421 650 IPR011989 -
Pte10g00879 1543 Gene3D - 1331 1543 IPR015943 GO:0005515
Pte10g00879 1543 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00879 1543 MobiDBLite consensus disorder prediction 1395 1417 - -
Pte10g00879 1543 ProSiteProfiles HEAT repeat profile. 538 570 IPR021133 -
Pte10g00879 1543 Gene3D Transferase(Phosphotransferase) domain 1 22 350 - -
Pte10g00879 1543 SUPERFAMILY Protein kinase-like (PK-like) 25 292 IPR011009 -
Pte10g00879 1543 SUPERFAMILY ARM repeat 426 832 IPR016024 -
Pte10g00879 1543 Gene3D - 1102 1213 IPR015943 GO:0005515
Pte10g00879 1543 ProSiteProfiles HEAT repeat profile. 706 744 IPR021133 -
Pte10g00879 1543 FunFam Phosphoinositide 3-kinase regulatory subunit 4 1106 1171 - -
Pte10g00879 1543 SUPERFAMILY WD40 repeat-like 1124 1543 IPR036322 GO:0005515
Pte10g00879 1543 Gene3D - 1227 1328 IPR015943 GO:0005515
Pte10g00879 1543 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1543 IPR045162 GO:0004674|GO:0016236|GO:0045324
Pte10g00879 1543 ProSiteProfiles Protein kinase domain profile. 27 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00879 1543 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 484 623 - -
Pte10g00879 1543 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1510 1543 - -
Pte10g00879 1543 ProSiteProfiles Trp-Asp (WD) repeats profile. 1130 1162 IPR001680 GO:0005515
Pte10g00879 1543 FunFam Protein kinase family protein / WD-40 repeat family protein 634 844 - -
Pte10g00879 1543 Pfam WD domain, G-beta repeat 1126 1162 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00879 Pte-Chr10 16295992 16305286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00879 31 324 AGC Kinase Gene Family AT3G08730 24.242 6.55e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Pte10g00879 Pkinase 1.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00879 K08333 - qsu:112039233 2328.52