Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00856 ATGGGGAATGTTTGCGTTGGTCCTAGTTTATCCAAAAATGGTTTTATTCAGTCTTTATCTGCTGCAATTTGGAGGTCTAAGTCAACTGGTGGATCGGTTTCTAACAATAGTAAAGGAGAAACAGAGCTTGAGACAACAGCTCGAGAACCTGAATCACCCTTGCCTGTCCAAAACAGACCTCCTGAACAAATAACTATGCCAAAACTAGAGACCGGCCCAGGTGCCAAACCCGACACTAGGCAAGATGCCAGACCATCAGAAGAGCAATCACAGCCCAAGAAACCTCATGTGAAGAGAGTAGGCAGTGCTGGACTTAGGATTGGTTCAGTGTTACAAACAAAAACTGGTAACTTTAAAGAATTTTTCTCATTGGGGAAGAAACTGGGACAAGGGCAGTTTGGTACTACATTTCTTTGCGTGGAGAAGGCAACCGGGAAAAAATTTGCGTGTAAATCTATTGCTAAGAGAAAACTGTTGTCTCAAGAGGATGTTGAGGATGTAAGAAGAGAAATTCAGATAATGCACCATCTGGCAGGGCATCCAAATGTTATATCTATCAAAGGAGCTTATGAGGATGCTGTTGCAGTTCATGTTGTGATGGACTTATGTGAAGGTGGTGAGCTTTTTGATAGGATAATTAAGCGAGGGCATTATACTGAAAGAAAGGCTGCTGATCTCATTAGGACTATTGTTGGGGTTGTGGAAGCCTGTCATTCTTTGGGTGTGATGCATCGAGACCTAAAGCCTGAGAACTTTCTCTTTGTCAATCAGCAGGAGGATGCTCTTCTCAAAACTATTGACTTTGGCTTGTCCATATTCTTTAAGCCAGGTGATGTATTTATGGATGTTGTCGGGAGCCCATATTACGTTGCACCAGAAGTTCTTCGGAAGCGCTATGGTCCAGAAGCAGATGTCTGGAGTGCTGGGGTGATTCTTTACATTCTTTTAAGTGGCGTCCCTCCATTTTGGGCTGAATCTGAACAAGGAATTTTTGAACAAGTTCTGCATGGCGATCTTGATTTCTCATCCGACCCTTGGCCAAGTATCTCAGAAAGTGCCAAAGATTTAGTAAGAAAAATGCTGGTTCGAAATCCAAAAAGACGACTGACTGCACATCAAGTTTTGTGTCATCCATGGATACAAGTTGATGGTGTGGCTCCTGACAAGCCACTAGATTCTGCTGTTCTTGTTCGGTTGAAACAATTTTCTGCAATGAATAAGCTTAAGAAAATGGCACTTAGAGTCATTGCTGAGAGCTTATCAGAAGAAGAAATAGCTGGACTGAAAGAAATGTTCAAGATGATAGATACCGATAACAGTGGTCAAATCACTTTTGAAGAACTTAAAGCTGGTTTGCAAAGAGTTGGGGCAAATCTTAAGGAATCTGAAATCTATGATCTGATGCAAGCGGCGGATGTGGATAACAGTGGGGCAATTGATTATTTGGAGTTTATTGCGGCAACTCTGCATCTAAACAAGATTGAAAAGCAAGATCATTTGTTTGCTGCGTTCTCTTATTTTGACAAGGATGGGAGTGGCTATATTACTCTTGATGAACTCCAGCAAGCGTGTGAGGAGTTTGGCGTCAAAGATGTTCACTTGGAAGAGATGATGAGAGAAGTTGATCAAGACAATGATGGTCACATAGATTACAATGAGTTCGTCGCCATGATGCATAAAGGGCACACTGGGGGGAAGGTTAAGGGCTTGGAGCATAGCTTTAGCATTGGGTTCAGAGAAGCCTTGAAAATATAG 1755 0.4222 MGNVCVGPSLSKNGFIQSLSAAIWRSKSTGGSVSNNSKGETELETTAREPESPLPVQNRPPEQITMPKLETGPGAKPDTRQDARPSEEQSQPKKPHVKRVGSAGLRIGSVLQTKTGNFKEFFSLGKKLGQGQFGTTFLCVEKATGKKFACKSIAKRKLLSQEDVEDVRREIQIMHHLAGHPNVISIKGAYEDAVAVHVVMDLCEGGELFDRIIKRGHYTERKAADLIRTIVGVVEACHSLGVMHRDLKPENFLFVNQQEDALLKTIDFGLSIFFKPGDVFMDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWAESEQGIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRNPKRRLTAHQVLCHPWIQVDGVAPDKPLDSAVLVRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKMIDTDNSGQITFEELKAGLQRVGANLKESEIYDLMQAADVDNSGAIDYLEFIAATLHLNKIEKQDHLFAAFSYFDKDGSGYITLDELQQACEEFGVKDVHLEEMMREVDQDNDGHIDYNEFVAMMHKGHTGGKVKGLEHSFSIGFREALKI* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00856 584 CDD EFh 499 559 IPR002048 GO:0005509
Pte10g00856 584 ProSitePatterns EF-hand calcium-binding domain. 542 554 IPR018247 -
Pte10g00856 584 SUPERFAMILY Protein kinase-like (PK-like) 122 381 IPR011009 -
Pte10g00856 584 ProSitePatterns EF-hand calcium-binding domain. 508 520 IPR018247 -
Pte10g00856 584 PANTHER SERINE/THREONINE-PROTEIN KINASE 113 554 - -
Pte10g00856 584 MobiDBLite consensus disorder prediction 27 41 - -
Pte10g00856 584 FunFam Calcium-dependent protein kinase 1 388 562 - -
Pte10g00856 584 ProSitePatterns Protein kinases ATP-binding region signature. 128 155 IPR017441 GO:0005524
Pte10g00856 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Pte10g00856 584 ProSiteProfiles EF-hand calcium-binding domain profile. 495 530 IPR002048 GO:0005509
Pte10g00856 584 ProSiteProfiles EF-hand calcium-binding domain profile. 459 494 IPR002048 GO:0005509
Pte10g00856 584 SUPERFAMILY EF-hand 420 560 IPR011992 -
Pte10g00856 584 SMART efh_1 533 561 IPR002048 GO:0005509
Pte10g00856 584 SMART efh_1 499 527 IPR002048 GO:0005509
Pte10g00856 584 SMART efh_1 463 491 IPR002048 GO:0005509
Pte10g00856 584 SMART efh_1 427 455 IPR002048 GO:0005509
Pte10g00856 584 ProSitePatterns EF-hand calcium-binding domain. 436 448 IPR018247 -
Pte10g00856 584 FunFam Calcium-dependent protein kinase 1 124 207 - -
Pte10g00856 584 MobiDBLite consensus disorder prediction 27 102 - -
Pte10g00856 584 MobiDBLite consensus disorder prediction 75 95 - -
Pte10g00856 584 ProSiteProfiles EF-hand calcium-binding domain profile. 533 564 IPR002048 GO:0005509
Pte10g00856 584 ProSiteProfiles Protein kinase domain profile. 122 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00856 584 Gene3D Transferase(Phosphotransferase) domain 1 208 404 - -
Pte10g00856 584 Pfam EF-hand domain pair 498 558 IPR002048 GO:0005509
Pte10g00856 584 Pfam EF-hand domain pair 428 488 IPR002048 GO:0005509
Pte10g00856 584 Gene3D - 405 563 - -
Pte10g00856 584 ProSitePatterns EF-hand calcium-binding domain. 472 484 IPR018247 -
Pte10g00856 584 ProSiteProfiles EF-hand calcium-binding domain profile. 423 458 IPR002048 GO:0005509
Pte10g00856 584 SMART serkin_6 122 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00856 584 Pfam Protein kinase domain 123 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00856 584 CDD STKc_CAMK 121 379 - -
Pte10g00856 584 FunFam Calcium-dependent protein kinase SK5 208 392 - -
Pte10g00856 584 Gene3D Phosphorylase Kinase; domain 1 124 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00856 Pte-Chr10 13446788 13452676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00856 1 579 EF-hand Containing Proteins AT5G04870 76.797 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte10g00856 Pkinase 5.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00856 K13412 - tcc:18586869 984.171