Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00851 ATGCAGTCCCACCACATTGAACAAGGTAATGGCGGAGAAGAGGAAGCTGCTATTTCAGCAAAACTGACAATAGAGCATGCCAAAAACTTTTTGAATACAGCAAAAGAAAGATTGAAGGACCAAACCGAAAACTATGACATGTTACTTGTGACCCTGAGAGATTTCTATTTAAGAAGGTCGGGCATTGCATTTGTCAAACAGTCTGCAATTGAAGCATTGAGGGGCCATGCCGACTTGGTAATTGGATTTAACACTTTCTTGCCCAAGAGATATGAGATAAATCTTCATGAGCTTCGGAGTGAAGCGCCTTTTGATGAAGTAATGAGAACTGTAGCTTTTAGTTTCTTAGCAAAAGTCAAGGTAGCTGCCATGTTTGAGGGCCATAGAGATTTGTTTTTGGAGTTCACTCGCATTGTGTCCTTTTTAGAACCAAAGAGAATACGCTAA 447 0.4049 MQSHHIEQGNGGEEEAAISAKLTIEHAKNFLNTAKERLKDQTENYDMLLVTLRDFYLRRSGIAFVKQSAIEALRGHADLVIGFNTFLPKRYEINLHELRSEAPFDEVMRTVAFSFLAKVKVAAMFEGHRDLFLEFTRIVSFLEPKRIR* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00851 148 PANTHER SIN3B-RELATED 21 120 IPR039774 GO:0003714
Pte10g00851 148 Gene3D Paired amphipathic helix 19 91 IPR036600 GO:0006355
Pte10g00851 148 SUPERFAMILY PAH2 domain 18 89 IPR036600 GO:0006355
Pte10g00851 148 Coils Coil 24 44 - -
Pte10g00851 148 ProSiteProfiles PAH domain profile. 20 90 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00851 Pte-Chr10 12653406 12654119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00851 22 95 WRKY Transcription Factor Family AT4G12020 33.784 2.60e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00851 K11644 - egr:104419316 84.7297