Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00846 ATGGTTGCGGCAACAGAGCAAAGCGCAGTGCCTCAAAACCATCAGCAGCAACAACAATCTTTGGCTGCATCTACAGCACAACCAAGTTCTACATCTACGCCATCTGCTCAAGAGGAGGCTTTGAAAAGAAATACAGATTGTGTTTACTTTCTGGCATCTCCCCTGACGTGCAAAAAGGGAAGTGATTGTGAGTACCGCCATAGTGATTTTGCTCGGGTTAATCCTAGGGATTGCTGGTTCTGGTTGAACGGGAATTGCTTGAATCCCAAATGTGGGTTCAGACATCCACCTCTTGATGGATTTTTAGGTGGTCAAGCTGCAACTATTAATGAACCTTCTTTCCCTCCTTCACAAAAGATAAGAACTCCAGGAACGCATGCATCATATGGTCCAAAAACCGTGCCTTGCGTGTTCTTCCAGCAGGGGCAATGCTTGAAAGGTGATATGTGCTTGTTCTTGCACGGTCCCAGTCCAAACACCAGTAGTAAAGCTCCTCAGTTTCAGGGAAGTAAACAAATCTCTGAGCCTCAAAAGCCAACTAAAGCTTTTGGTACTCTTGAGAAGTGTAGTCAAGAGAAGATAATTACTCAAGCAAATGTGAGCAAGTCAGTTGCAGATGGTTCTGTAGCTAAATCAGCACAGAAAATTGGAACCACTGCAAAAACAAATTCATCTTCTGACAGGATTGTGCCTCAACCTATAAGTTTCAACTTTGATGCTTCTAGATCAAAGGCATCAAGCATTTCAGCCACTGACAATGAAATCCCTGCTACTCGATTCCATCGTCCAAACCAACTTCATGCATCAGATCATCATCATTTACAGAACGGTAAAGTCAGTGAAGAATTTCAACGTGAATCCTCTCCTGGGTTTGATGTTCTGGTGGATGATGATCTCAGAGCATCTGATGATTACTACCATGATGAGGTTCACTTTGGAAGAGAAGATTCTATGGCTGCATATGATGGACATCCTGTTGATTATGATGCATTGACTGATATGCATGACCGTGGAAGATTTCATGACTCACAAACTTATACTTCGTTTGGTCACATGCAGCAGCCATGTCCTTGGGACCAGCACATGACTTCATCAGAGAGAATTAAAGGGGGGCCATATCTTTTGGAAAGAAGAGGTTATCAGAAATCTGCTAGTCCTGAGAACACAGTGTCTGACCTTCGTTGCCGACTGTCTAAGCAAAGGAGAGTAGATGATCTGAGATCAGTTGTAAGCCATGATGTTCCCCTGGATAATCACTACGACGAGAGAAGTTTCATGTCATCATCACGAAAGGATTTGACAAGGCAACAACTCAAGGAGAGCTCACTCAGTAATCGCCTCAGAGGAAGAATAAAGCTCCCAGGGAGGTCTTCTGTCAGCGGTGACGATTGCCTAGAGAGGCAATTGGACGGGAGAAGAAACAGGAAATTATCCCCAGAAGGATCTCAGGTCTCCTCTTATCAGGGAAGGCTTCGAAATAGAATAAAGGGGAGGGGATCAATTGATTATGATGATGGAAAAAACTTGAGGTTTGGACAGACAAGGAGAGACATGAATGCTGGGAGCTCTGATTTTGCAGGTCCAAAAAGTCTTGCAGAACTGAAAACTGTTAAAACTACCGAGAATAAGGAGCAATATTTACTTCGGAAGAGAAAGTTTGAGGATGATTACCTATCTCATGACATTTCTTTTGAGGGTCCAAAACCTCTCAGTGAAATTCTCAAGGAAAAGCGGGGAGCTGCAGCTTCTTCTCCTGGAACTATCATTTCATCCAATAATAAAGAAGACGGCAAGGCCTATGAAATTGGAGAATCTAAGACAAGTGGCATCCATAATAAAGTTGCGGTAGGAACTCAAAGCGGCCTTGCCGCTCTTGACAAGGATGATTCCAGTAAAAATGCATCTAAAGGCGTACATAAAACCAATTTAATTCATGGTCAGTTATCTGAAGGACCTCTTGCAAATGAGCACGAGGCTGAAGATGGAATAATTTACGATGGAATGCTGGAAGGCCAGGAGCATGAAGGCGACAAACAGAGGGCAGGGGAGTATGATGATCAAGTTTATGAAGAAGACTATGCTTATGATGGATTTGAACATGCAGATCAGGAAGAAGAGTACCTGGATGATGAAGATGGAGATGACTTTGCTAAGAAGATTGGTGCTGTGCTTTCATGA 2178 0.433 MVAATEQSAVPQNHQQQQQSLAASTAQPSSTSTPSAQEEALKRNTDCVYFLASPLTCKKGSDCEYRHSDFARVNPRDCWFWLNGNCLNPKCGFRHPPLDGFLGGQAATINEPSFPPSQKIRTPGTHASYGPKTVPCVFFQQGQCLKGDMCLFLHGPSPNTSSKAPQFQGSKQISEPQKPTKAFGTLEKCSQEKIITQANVSKSVADGSVAKSAQKIGTTAKTNSSSDRIVPQPISFNFDASRSKASSISATDNEIPATRFHRPNQLHASDHHHLQNGKVSEEFQRESSPGFDVLVDDDLRASDDYYHDEVHFGREDSMAAYDGHPVDYDALTDMHDRGRFHDSQTYTSFGHMQQPCPWDQHMTSSERIKGGPYLLERRGYQKSASPENTVSDLRCRLSKQRRVDDLRSVVSHDVPLDNHYDERSFMSSSRKDLTRQQLKESSLSNRLRGRIKLPGRSSVSGDDCLERQLDGRRNRKLSPEGSQVSSYQGRLRNRIKGRGSIDYDDGKNLRFGQTRRDMNAGSSDFAGPKSLAELKTVKTTENKEQYLLRKRKFEDDYLSHDISFEGPKPLSEILKEKRGAAASSPGTIISSNNKEDGKAYEIGESKTSGIHNKVAVGTQSGLAALDKDDSSKNASKGVHKTNLIHGQLSEGPLANEHEAEDGIIYDGMLEGQEHEGDKQRAGEYDDQVYEEDYAYDGFEHADQEEEYLDDEDGDDFAKKIGAVLS* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00846 725 ProSiteProfiles Zinc finger C3H1-type profile. 72 98 IPR000571 GO:0046872
Pte10g00846 725 MobiDBLite consensus disorder prediction 463 477 - -
Pte10g00846 725 Pfam RNA-binding, Nab2-type zinc finger 135 155 - -
Pte10g00846 725 ProSiteProfiles Zinc finger C3H1-type profile. 130 157 IPR000571 GO:0046872
Pte10g00846 725 Gene3D - 32 98 - -
Pte10g00846 725 Gene3D - 123 193 - -
Pte10g00846 725 Pfam Zinc-finger containing family 42 96 IPR041686 -
Pte10g00846 725 FunFam Zinc finger CCCH domain-containing protein 17 35 98 - -
Pte10g00846 725 ProSiteProfiles Zinc finger C3H1-type profile. 41 70 IPR000571 GO:0046872
Pte10g00846 725 MobiDBLite consensus disorder prediction 495 512 - -
Pte10g00846 725 SMART c3hfinal6 42 69 IPR000571 GO:0046872
Pte10g00846 725 SMART c3hfinal6 74 97 IPR000571 GO:0046872
Pte10g00846 725 SMART c3hfinal6 130 156 IPR000571 GO:0046872
Pte10g00846 725 MobiDBLite consensus disorder prediction 427 526 - -
Pte10g00846 725 MobiDBLite consensus disorder prediction 1 38 - -
Pte10g00846 725 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 38 723 - -
Pte10g00846 725 SUPERFAMILY CCCH zinc finger 132 155 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00846 Pte-Chr10 12241492 12245256 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte10g00846 zf-CCCH_3 9.4e-11 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00846 - - qsa:O6P43_032347 642.884