Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00830 ATGCTTCCACCTGGTGAATGGTACTGCCCAAACTGTACTTGTAAATTTTGTGGACTCGCTGGTGCAACTGTCAATCAAGTTAATAATGTCTCCATCCTCCGTGCGTGCCACTTGTGTGAGAAGAAATATCATGAATCCTGTATGAAGGAGATATATTCCCCTCCAGTTGATTCTAATATTTCCGATCCTGGTTTTTGTGGAAAAGCTTGTAAAGAGCTTTTTGAGCATCTTAAGAAGTATCTCAGTACCAAACATGAATTGGATGCGGGCTTTTCTTGGTCTCTTATCCATAGATGTGACGAAGACACAGATGCAGCTTTTAGAGGAATATCTCAACGCGTGGAATCTAACTCTAAGCTAGCAGTTGCACTGAATGTGATGGATGAATGTTTTCGGCCCATTGTTGACTGCAGGAGTGGTATCAATGTAATTCGAAATGTGCTTTATAATAGTGGATCAAACTTCTATCGATTAAGTTACAGTGGCTTTTATACTGCTGTTCTGGAGAGAGGGGATGAAATTATTTCTGCAGCGTCTATCAGGTTCCATGGTCCTAAATTGGCAGAAATGCCATTCATTGGAACTCGCCAAATGTATAGGCTTCAAGGGATGTGTCGACGCCTCCTTTCTGCCCTTGAATTGGTATACAATACTAGTTGA 660 0.4136 MLPPGEWYCPNCTCKFCGLAGATVNQVNNVSILRACHLCEKKYHESCMKEIYSPPVDSNISDPGFCGKACKELFEHLKKYLSTKHELDAGFSWSLIHRCDEDTDAAFRGISQRVESNSKLAVALNVMDECFRPIVDCRSGINVIRNVLYNSGSNFYRLSYSGFYTAVLERGDEIISAASIRFHGPKLAEMPFIGTRQMYRLQGMCRRLLSALELVYNTS* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00830 219 PANTHER PHD FINGER PROTEIN 12 1 213 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00830 Pte-Chr10 11442652 11444989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00830 1 213 PHD Transcription Factor Family AT1G05380 60.094 2.13e-86 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00830 - - qsa:O6P43_003370 340.117