Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00826 ATGGCTAATGCCTCATATCTTTTCTTTCTTCCACTTGTACCAATCCTTTTCTTCTATGTCCGTAAGTATACGAAGTCCTACACTTTAGAGAAGTTACAACTTCCGCCAGGCCCCAGACCATGGCCAGTGATTGGCAACATTCTCCATATAATGGTGGAAAAGCCTTATATCTCCATGGCAAAATTTGCTGAAGTATACGGACCCCTAATCTCACTCAAGTTTGGCTCTCAACTGTATATCATTGGATCCTCGCCAATGGCCGCAGCTGAAATCCTAAAAACTCATGATCGTGTACTCTCAGGTAGAACTACACGACAAGCTAGTCCTCCTAGAGGGAATGGCCTCGAAGGTTTTTCTATTATTGCTGCAAATGAATGCACAGAAACGTGGAAATTCCTAAGAACTTTGTGCCGAAGTGAACTGTTTTCAGGAAGAGCTATTGAGTCACATGCCAGCTTACGTGAGAAAAAAACAGAGCAGATGGTAGAATACCTCAGAACCATGGAGGGGAACGTAGTCAGTATTCGAGAAACTTTGTATACGGTAGTGTTGAACACCGTGTCCAACATGTTCGTGTCTCAGGATATGGTTTTGTTTGGTACACAACGAGATACTTGTGGATTCAAGGACAAGGTTTCAAGGATTATAGAGCTGCATGCTATACCAAACATCGGTGACTTGTATCCAATACTTGCAAAATTTGATATCCAAGGTCTGAGAAAGAAGACTACCCAGTTATTTAACCAGCTTGCTGATGTCTGGCAACCTTTCGTAATAGAAAGAAGACTCAGAGATGGCTGTAGTGAACAGAACCATCGTGATTTCTTGGATGCCTTTCTTGCCAACAACTTTTCTGATAATCAAATAAAGATGATGTTCAATGAGCTTTTGCTTGCTGGGGGTGACACAACCACCACAGTAGTGGAGTGGGCAATGGCTGAGTTAATCAAGAACGGAGAAGCAATGAAGAAGCTCAGAGAAGAGCTGAAGGAAGCAGTCCATGGGCAAATGAAAATCAAAGAGTCTCAAATATCCCAACTTCCATATTTGCAAGCTTGTATTAAAGAAACATTGAGGTTACACCCACCTGCGCCCTTGTTTCTTCCACACCGTGCTGTTGAAAGTTGCAAGATAATGAATTATCAAATTCCAAAGAACTCAAATGTAATTGTCAACTATTGGGCAATTAGTCGTGACCCGTCTGTGTGGGAAGACCCTTTAATCTTTAAGCCAGAGAGGTTTATCGGTTCCAATTTAGATTTCAAAGGCAAAGACTATGAGTATCTACCATTTAGTTCAGGAAGGAGAATGTGCCCTGGATTACCTATGGCTGCAAAGCTAGTTCCTCTGATGCTAGCTTCCCTGGTTGATTTCTTTGATTGGGACCTTCCAAGTGTTAATGATCCAACACAACTAGACATGACCGATACATTACGTGTGGGGTCATTGATGATGGAACAACCTTTGCTAATCATTCCCAAATGCATATTGTAA 1494 0.419 MANASYLFFLPLVPILFFYVRKYTKSYTLEKLQLPPGPRPWPVIGNILHIMVEKPYISMAKFAEVYGPLISLKFGSQLYIIGSSPMAAAEILKTHDRVLSGRTTRQASPPRGNGLEGFSIIAANECTETWKFLRTLCRSELFSGRAIESHASLREKKTEQMVEYLRTMEGNVVSIRETLYTVVLNTVSNMFVSQDMVLFGTQRDTCGFKDKVSRIIELHAIPNIGDLYPILAKFDIQGLRKKTTQLFNQLADVWQPFVIERRLRDGCSEQNHRDFLDAFLANNFSDNQIKMMFNELLLAGGDTTTTVVEWAMAELIKNGEAMKKLREELKEAVHGQMKIKESQISQLPYLQACIKETLRLHPPAPLFLPHRAVESCKIMNYQIPKNSNVIVNYWAISRDPSVWEDPLIFKPERFIGSNLDFKGKDYEYLPFSSGRRMCPGLPMAAKLVPLMLASLVDFFDWDLPSVNDPTQLDMTDTLRVGSLMMEQPLLIIPKCIL* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00826 497 Coils Coil 312 332 - -
Pte10g00826 497 SUPERFAMILY Cytochrome P450 35 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte10g00826 497 Pfam Cytochrome P450 35 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte10g00826 497 CDD CYP76-like 63 493 - -
Pte10g00826 497 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte10g00826 497 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte10g00826 497 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte10g00826 497 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte10g00826 497 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte10g00826 497 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte10g00826 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Pte10g00826 497 Gene3D Cytochrome P450 27 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte10g00826 497 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 13 494 - -
Pte10g00826 497 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte10g00826 497 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte10g00826 497 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte10g00826 497 FunFam Predicted protein 297 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00826 Pte-Chr10 11091880 11093634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00826 2 493 Cytochrome P450 AT2G45550 37.897 1.20e-116 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00826 - - qsu:112033921 539.65