Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00824 ATGGGTCCTTCCCGTGGGACTGGAGGGTTAAGTCAATCTTCTGCAAGTTCTGGAATATTCTTTCAAGGGGATGTGCAGCCCCAGGCTTTAGTTAACTCTCACTTGAGCTCATCTTTTGGGAACACGTCGAACTCCATACCTGGAACTGGGTGCCTGAATTTGGGTTCGCTTTCTGGGGATATGAACAATGCAGCTATCAATAGTGTTCCGAACTCAGCACCAAGTGTCGGAGCAAGTTCGTTGGTGACTGATGCAAATTCTGCCTTTTCAGGAGGTCCTCATTTGCAAAGAAGTGCTAGCTTTAATACTGACTCTTACATACGCTTGCCATCTTCTCCCATGTCATTTTCATCAAATAATGTCAGCATCTCGGGGTCCTCTGTGAGAGATGGTTCTTCCATTGTACAGCAGAACTCTCATCATGATCCCAATGGGCAACATGTCACTCGGCAGCAGCAAGGGGTTTCAAGGGCTACATCATTACCTTCAATACAAGCTAGCCAGTCTCATATTCCTATGGTTGCACGGGGATCTGGATCCTTCGTTCAGGATCCAAGCAGTTTGTTACACCTGCAGAAGAAACCTAGACTGGATATGAAACAGGAGGAGATGCTGAACCAACAGGTGATACAACAATTGCTTCAGAGACAGGATCTTCAGTTTGAAGGTCCTCAGTTGCAAGCATTTCTTCAGCAGCAAAGATTGAGGCAGCAGCATTTTCTGCAGTCTATGCCTCAGTTACAAAGAGCCCAATCACAGCAGCAGCATATGCAATTGAGAGAGCAACTTCAGCAGCAAGCCATGCCTTCCATGAAGAGGCCTTATGATGGTGGAGTATGTGCACGCCGATTGATGCAATATCTATATCATCAGCATCAGAGACCCCAAAACAACAACATTGTGTACTGGAGAAAATTTGTTTCGGAGTATTATTCTCCTCGTGCCAAGAAAAGATGGTGTTTGTCGTTATATGAAAATGTTGGTCATCATGCACTTGGTGCGTTCCCTCAAAATTCCACGGATGGATGGCAATGTGACATATGTGGATCTAAATCTGGAAAGGGTTTTGAGACAACTTTTGAAGTTCTTCCTATACTTAACGAGATCAAATTTGGCAGTGGAGTCATTGATGAACTTCTGTTTGTGGACTTACCACGTGAATGTAGATTTCCTTCTGGAATTATGATGCTGGAATATGGAAAGGCGGTTCAAGAAAGTGTGTATGAGCAACTACGGGTTGTTCAGGAGGGTCACCTTCGTATTATATTTACACAAGATTTAAAGATATTATCTTGGGAATTTTGTGTCAGACGTCATGAAGAACTGCTTCCTCGTAGGTTGGTGCAACCGCAGGTGAATCAATTGGTCCAGATAGCACAAAAATGCCAGACTACAATTTCTGGAAGTGGATCTGATAGCATATCACAACAGGATCTGCATACAAATGGCAATATGGTACTGACAGCTGGACGTCAACTTGCCAAGAGTTTGGAATTGCAGTCGTTGAATGACTTGGGTTTCTCAAAGCGATATGTGAGGTGCTTGCAGATCTCCGAGGTTGTCAATAGCATGAGAGATCTGATAGATTTTTGCCGTGAGCACAAAGCTGGGCCTATTGATGGATTGAAAAATTATCTTCGGCATGCACCTGCTCCCAAGCTTCAGATGCAAAAGATGCAGGAGATGGAACAGCTAGCAAGTGTACAAGGCCTGGCTAATGATAGAAATGCAATTGATAAGATGGTGCCATTGCATTCAAACCAAATAAGCAGTAATCATAACCTCGTTGGCCGAGTTGCATTAACTGGTTCATCTCAGGCTGCTATGCAACTCACTAACTTCCAAAACATGCTCCTGAGACAAAACTCCATGAAAGCAAACTCTCACTCACTCCAACAGGAACCATCATCTTCCTTCAATCCAAACCAGATCCCACCTTCCACCACCCGAGGTGCCACAAGTTTAGATTCAGGTTCCTTCAAGAACTTGCATGTTAGGGGTCTCCCGAGTGCTCATTTGGGGCCTCGGCATCTTCAACACCTTCAGCAACGTACATTGAATGCTAATAGTTTACTGCAACAAAGTCACTCACAATCCTCCCAAGGAAATCAGTCGTTACAGCAGCAGATGATCCAGCAACTTCTGCAGGAGATGTCAAATACTGATGGGGGTGGAATGCAACCACAGTCGCTTGCTGGGCCCAATTCTAGCGTAGGTATGGTAAAGAGTACAATAGGTTTTGGAGGCAATCCTTCATCAATGGCAGCTTCCACAACAAATATCTCTGGAAGTAATGGATCTGCACCTAGCCGGAATAACAGTTTTAAAGGTGCTTCCAACGGTGATAGTTCTGTAGCTGGTGCCAACAACGGGTTTAACCAAAGAGCAGCTGATGCTTCTCAAAATCTACATTTGCAAGATGTTGTTCAAGACATTGCTCGTGAATTCACAGATAATGGGTTCTTTAATAGTGATCTAGATGACAACCAAGGTTATGGGTGGACGGCATGA 2511 0.4436 MGPSRGTGGLSQSSASSGIFFQGDVQPQALVNSHLSSSFGNTSNSIPGTGCLNLGSLSGDMNNAAINSVPNSAPSVGASSLVTDANSAFSGGPHLQRSASFNTDSYIRLPSSPMSFSSNNVSISGSSVRDGSSIVQQNSHHDPNGQHVTRQQQGVSRATSLPSIQASQSHIPMVARGSGSFVQDPSSLLHLQKKPRLDMKQEEMLNQQVIQQLLQRQDLQFEGPQLQAFLQQQRLRQQHFLQSMPQLQRAQSQQQHMQLREQLQQQAMPSMKRPYDGGVCARRLMQYLYHQHQRPQNNNIVYWRKFVSEYYSPRAKKRWCLSLYENVGHHALGAFPQNSTDGWQCDICGSKSGKGFETTFEVLPILNEIKFGSGVIDELLFVDLPRECRFPSGIMMLEYGKAVQESVYEQLRVVQEGHLRIIFTQDLKILSWEFCVRRHEELLPRRLVQPQVNQLVQIAQKCQTTISGSGSDSISQQDLHTNGNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMRDLIDFCREHKAGPIDGLKNYLRHAPAPKLQMQKMQEMEQLASVQGLANDRNAIDKMVPLHSNQISSNHNLVGRVALTGSSQAAMQLTNFQNMLLRQNSMKANSHSLQQEPSSSFNPNQIPPSTTRGATSLDSGSFKNLHVRGLPSAHLGPRHLQHLQQRTLNANSLLQQSHSQSSQGNQSLQQQMIQQLLQEMSNTDGGGMQPQSLAGPNSSVGMVKSTIGFGGNPSSMAASTTNISGSNGSAPSRNNSFKGASNGDSSVAGANNGFNQRAADASQNLHLQDVVQDIAREFTDNGFFNSDLDDNQGYGWTA* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00824 836 PANTHER LIM DOMAIN-BINDING PROTEIN 44 822 IPR029005 -
Pte10g00824 836 Pfam LIM-domain binding protein 283 543 IPR029005 -
Pte10g00824 836 MobiDBLite consensus disorder prediction 127 161 - -
Pte10g00824 836 MobiDBLite consensus disorder prediction 719 791 - -
Pte10g00824 836 MobiDBLite consensus disorder prediction 625 661 - -
Pte10g00824 836 MobiDBLite consensus disorder prediction 625 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00824 Pte-Chr10 11076515 11083043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00824 269 549 C2H2 Transcription Factor Family AT1G43850 56.228 3.71e-104 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00824 - - pper:18787712 1088.17