Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00795 ATGGAGCGCAAATCAGTTCAGTATCTTGGTCATGTAGCTGCACTAATAATTTGTATGGTGTCTATGCTATTACTTCCTTTAACTGAAGAAGCTGGAATGACTACTTCCATCAAGACTGATATGCAAGCTCTTCTCATGTTCAAAAAGATGATTCAGCAGGACCCCAATGATGTTCTTTCTGGATGGCAACTTGATAAGAATATATGCAGTTGGTATGGTGTTTCATGCTCTCTAGGACGTGTAACCCAGCTTGATCTTGGTGGAGGCTACCTTGTTGGGACTGTATCTCTTGACCCTTTGGCTTCCTTGGACATGTTATCAGTTTTAAAGTTGTCTGTAAACTCCTTGTTTGTAAATTCCACTAGTTTGCTGCAACTCCCATTTAGCTTGACGCAGCTTGATCTCTCTTTCACTGGACTTGTAGGTCTTGTCCCTGACAAGCTTTTCTCTATATGTCCTAATCTTGTTTCAGTAAACCTCGCTTACAACAATTTGACAGGTTCTGTACCAGAAAATTTCTTGTACAATTCAAATAAACTACAGGTACTTGATCTTTCTTTTAACAATTTGACGGGCTCGCTTTCTGGTTTGAAGACAGACTCATGCAATTCACTGCAGCTACTTGATTTGTCTGGAAACCGTTTATCAGATTCTATCCCCACTTCCATTTCAAATTGCACTAGCTTGAACACTTTGAATTTAGCCTCCAATATGATGACAGGGGAAATCCCAATATCAATAGGCCAGCTAACTAGTTTGCAGAAATTAGATCTATCTAGAAACCAACTGATTGGTTGGATCCCTTCTGAGCTAGGAAATACATGTGGCTCACTTTTAGAACTCAAGCTCTCACAGAACAACATTTCTGGCTCAATACCGTCGACTTTTTCCTCATGCTCATGGCTGCAAATTATTGATCTTTCCAACAACAATATATCAGGTGCATTGCCAGGTTCCATATTTCAGAATCTGTCATCATTGGAGGAATTGGTGTTGAGCAACAATGTCATTTCTGGAGAATTTCCTGCATCCATATCATTCTGTAAGAAATTGAGGAAAGTGGACTTAAGTTCAAATAGGATTTCAGGGATCATTCCTCCTGATATTTGTCCAGGGGCCTCTTCACTTGAAGAGCTGAGAATGCCAGATAATCTCATAGCAGGAGAAATCCCAGCTGCACTGTCAAAATGTTCGCAATTGAAGACGTTAGATTTTAGCCTCAACTATCTCAATGGTACGATCCCACCTGAGCTTGGGAATTTAGAAAATCTTGAGCAGTTAATAGCATGGTTCAATGGCTTGGAAGGGAAGATTCCACCTGAATTAGGCAAGTGCAAGAATCTCAAGGATCTCATTCTCAATAATAACAAATTGAGTGGCACCATCCCAACAGAATTGTTCAGTTGCAGTAATCTTGAATGGATATCACTCACAAGCAACCAACTCAGTGGTGAAATCCCAAGGGAATTCGTTCGCTTGACAAGACTGGCAGTCCTTCAGCTAGGAAACAACAGCTTGACAGGGGAGATACCAGCAGAAATAGCAAAATGTAGCAGTTTGGTGTGGTTGGACTTGAACAGTAACAAGCTTACTGGGGAAATCCCTCCAAGAATCGGAAGGCAGCAAGGAGCGAAAGCATTGAGTGGAATTCTTTCAGGAAATACATTGGTGTTTGTACGTAATGTGGGAAATTCATGCAAAGGAGTTGGAGGGCTGTTGGAATTTTCTGGAATTCGACCTGAAAGACTATTGCAGGTACCATCACTGAAAACTTGTGATTTCACAAGGTTGTATTCTGGTCCAGTTTTAAGCCTTTTTACACAATACCAAACTCTGGAGTATCTTGATCTTTCATACAATGATCTAAGAGGGAAAATCCCTGATGAATTTGGTGACATGATTGCCCTACAAGTCCTTGAATTGTCTCACAATCAATTATCTGGAGAAATCCCTTCATCACTTGGCCAGCTTAAAAATCTAGGTGTGTTTGATGCTTCGCACAACGGATTGCAAGGTCAAATCCCAGAGTCATTCTCAAACTTGTCATTCTTAGTACAAATTGATCTTTCCTATAATGAACTAACTGGGCAAATACCACCAAGAGGACAGTTGAGTACACTGCCAGCAAGTCAGTATGCAAACAATTCAGGGCTTTGTGGAGTCCCTTTGCCTGAATGTCAAAACAACCCACCAACAACGAACTCTAGTGATGATGGAAAAGGAGAAGGCAACAGGTCAGGACCAGCATCTTGGGCTAACAGCATCATCTTGGGAGTTCTTATATCCATTGCTTCTGTTTGTGTATTGGTAGTGTGGGCAATCGCAATGCGCGCAAAGCGGAAGGAGGCAGAGGAAGTCAAGATGCTTAACAGCTTGCAGGCAATTCATGCACCAACTACATGGAAGATTGACAAGGAGAAAGAACCTTTGAGCATTAATGTGGCAACATTTCAGAGACAGCTAAGGAAGCTAAAGTTCTCCCAGCTGATTGAGGCAACAAATGGTTTCTCTGCCGCAAGCCTTATTGGTTCTGGAGGATTTGGAGAAGTATTCAAGGCAAACCTGAAGGATGGATCAAGTGTTGCAATCAAAAAGCTTATCCGACTAAGCTGCCAAGGGGATCGAGAATTCATGGCTGAAATGGAAACCCTAGGCAAGATCAAGCATAGGAACCTTGTACCTCTATTGGGATACTGTAAAGTTGGCGAGGAGAGGTTGCTTGTGTATGAGTTCATGGAATATGGCAGCTTAGAAGAAGTGCTGCATGGGAGAACAAAATCACAAGACAAACGGACTTTAACATGGGATGAAAGGAAAAAAATTGCTAGAGGTGCTGCAAAAGGGCTGTGCTTCCTGCACCATAATTGCATACCCCACATTATACACCGTGACATGAAATCAAGCAATGTACTACTTGATCATGAGATGGAAGCAAGAGTTTCTGATTTTGGAATGGCAAGGCTCATAAGTGCACTTGATACGCACCTCAGTGTAAGCACATTGGCCGGAACACCAGGATATGTCCCACCGGAGTACTACCAAAGTTTCAGGTGCACAGCTAAAGGAGATGTATATTCATTTGGGGTTGTCATGTTGGAACTCCTAACAGGTAAACGCCCCACAGATAAAGAGGATTTTGGTGATACTAACTTGGTGGGGTGGGCAAAAATGAAGGTTCGTGAAGGGAAACAAATGGAAGTGATAGACAGTGAGTTACTTTCAGTGACTAAAGGAACAGATGAAGCTGAAGCTGTAGAAGTGAAAGAGATGACAAGATATCTCGAGATAACCCTGCGTTGCGTTGATGACTTCCCTTCCAAAAGGCCAAACATGTTGCAGGTAGTAGCTATGTTGAGAGAGCTGATGCCTGAATCAGCTGAAGGAAGTAGCAATAGTGCTTAA 3402 0.4209 MERKSVQYLGHVAALIICMVSMLLLPLTEEAGMTTSIKTDMQALLMFKKMIQQDPNDVLSGWQLDKNICSWYGVSCSLGRVTQLDLGGGYLVGTVSLDPLASLDMLSVLKLSVNSLFVNSTSLLQLPFSLTQLDLSFTGLVGLVPDKLFSICPNLVSVNLAYNNLTGSVPENFLYNSNKLQVLDLSFNNLTGSLSGLKTDSCNSLQLLDLSGNRLSDSIPTSISNCTSLNTLNLASNMMTGEIPISIGQLTSLQKLDLSRNQLIGWIPSELGNTCGSLLELKLSQNNISGSIPSTFSSCSWLQIIDLSNNNISGALPGSIFQNLSSLEELVLSNNVISGEFPASISFCKKLRKVDLSSNRISGIIPPDICPGASSLEELRMPDNLIAGEIPAALSKCSQLKTLDFSLNYLNGTIPPELGNLENLEQLIAWFNGLEGKIPPELGKCKNLKDLILNNNKLSGTIPTELFSCSNLEWISLTSNQLSGEIPREFVRLTRLAVLQLGNNSLTGEIPAEIAKCSSLVWLDLNSNKLTGEIPPRIGRQQGAKALSGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLLQVPSLKTCDFTRLYSGPVLSLFTQYQTLEYLDLSYNDLRGKIPDEFGDMIALQVLELSHNQLSGEIPSSLGQLKNLGVFDASHNGLQGQIPESFSNLSFLVQIDLSYNELTGQIPPRGQLSTLPASQYANNSGLCGVPLPECQNNPPTTNSSDDGKGEGNRSGPASWANSIILGVLISIASVCVLVVWAIAMRAKRKEAEEVKMLNSLQAIHAPTTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGSGGFGEVFKANLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEFMEYGSLEEVLHGRTKSQDKRTLTWDERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLTGKRPTDKEDFGDTNLVGWAKMKVREGKQMEVIDSELLSVTKGTDEAEAVEVKEMTRYLEITLRCVDDFPSKRPNMLQVVAMLRELMPESAEGSSNSA* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00795 1133 Gene3D Phosphorylase Kinase; domain 1 797 911 - -
Pte10g00795 1133 Gene3D Ribonuclease Inhibitor 39 151 IPR032675 -
Pte10g00795 1133 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 408 1120 - -
Pte10g00795 1133 ProSitePatterns Protein kinases ATP-binding region signature. 842 865 IPR017441 GO:0005524
Pte10g00795 1133 ProSiteProfiles Protein kinase domain profile. 836 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00795 1133 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Pte10g00795 1133 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 573 730 - -
Pte10g00795 1133 SUPERFAMILY Protein kinase-like (PK-like) 817 1118 IPR011009 -
Pte10g00795 1133 ProSitePatterns Serine/Threonine protein kinases active-site signature. 960 972 IPR008271 GO:0004672|GO:0006468
Pte10g00795 1133 Pfam Leucine rich repeat 302 361 IPR001611 GO:0005515
Pte10g00795 1133 Pfam Leucine rich repeat 605 646 IPR001611 GO:0005515
Pte10g00795 1133 Pfam Leucine rich repeat 204 263 IPR001611 GO:0005515
Pte10g00795 1133 SMART serkin_6 836 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00795 1133 MobiDBLite consensus disorder prediction 726 746 - -
Pte10g00795 1133 FunFam LRR receptor-like serine/threonine-protein kinase 200 274 - -
Pte10g00795 1133 SMART LRR_sd22_2 299 326 - -
Pte10g00795 1133 SMART LRR_sd22_2 177 199 - -
Pte10g00795 1133 SMART LRR_sd22_2 657 683 - -
Pte10g00795 1133 SMART LRR_sd22_2 202 228 - -
Pte10g00795 1133 PRINTS Leucine-rich repeat signature 250 263 - -
Pte10g00795 1133 PRINTS Leucine-rich repeat signature 180 193 - -
Pte10g00795 1133 FunFam serine/threonine-protein kinase BRI1-like 2 39 150 - -
Pte10g00795 1133 FunFam serine/threonine-protein kinase BRI1-like 2 797 911 - -
Pte10g00795 1133 SUPERFAMILY L domain-like 62 317 - -
Pte10g00795 1133 Gene3D - 551 607 - -
Pte10g00795 1133 Pfam Brassinosteroid receptor island domain 548 606 IPR045381 -
Pte10g00795 1133 Gene3D Transferase(Phosphotransferase) domain 1 912 1132 - -
Pte10g00795 1133 Gene3D Ribonuclease Inhibitor 169 726 IPR032675 -
Pte10g00795 1133 SUPERFAMILY L domain-like 575 722 - -
Pte10g00795 1133 SMART LRR_typ_2 324 348 IPR003591 -
Pte10g00795 1133 SMART LRR_typ_2 518 541 IPR003591 -
Pte10g00795 1133 SMART LRR_typ_2 633 657 IPR003591 -
Pte10g00795 1133 SMART LRR_typ_2 421 445 IPR003591 -
Pte10g00795 1133 SMART LRR_typ_2 202 226 IPR003591 -
Pte10g00795 1133 SMART LRR_typ_2 250 274 IPR003591 -
Pte10g00795 1133 SMART LRR_typ_2 493 517 IPR003591 -
Pte10g00795 1133 SMART LRR_typ_2 446 469 IPR003591 -
Pte10g00795 1133 SMART LRR_typ_2 302 323 IPR003591 -
Pte10g00795 1133 MobiDBLite consensus disorder prediction 723 746 - -
Pte10g00795 1133 CDD STKc_IRAK 842 1121 - -
Pte10g00795 1133 SUPERFAMILY RNI-like 242 536 - -
Pte10g00795 1133 Pfam Protein tyrosine and serine/threonine kinase 840 1117 IPR001245 GO:0004672|GO:0006468
Pte10g00795 1133 FunFam serine/threonine-protein kinase BRI1-like 2 912 1129 - -
Pte10g00795 1133 ProSiteProfiles Leucine-rich repeat profile. 179 201 IPR001611 GO:0005515
Pte10g00795 1133 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 371 558 - -
Pte10g00795 1133 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 275 365 - -
Pte10g00795 1133 Pfam Leucine Rich repeat 177 192 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00795 Pte-Chr10 10397049 10400857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00795 14 1130 Receptor kinase-like Gene Family AT1G55610 48.187 0.0 1005
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pte10g00795 PK_Tyr_Ser-Thr 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00795 - - gmx:100789959 1824.68