Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00793 ATGGAGGATGACGCACTAAACATTCGCAATTGGGGCTATTATGAGCCGTCCTTCAAGGGGCATCTCGGTCTGCAACTCATGTCAAGTATGACGGATCATGATACAAAGCCATATTTATCTGGGCGTGATCCTAATATACTGGTTAATCCAAATGGAACTTTCCATCACCGCGATTATGTAGTCTCTGGAGAGCAGATTCCAATGAATTATATGCGAGACAGTTGGATAAACCAAAGGGATAAGTTTCTAAATATCCTGCCCCCAAATCCTAGCTATCCTGTTCTGTCTGAAACATCAGGATCAGGAGTTCACTCCTTGCAGAACATTCAGCAGCGTGACATATCAACAGATGAAAGAGTGGATAGAACTGAAGAACCAGCTGTTAAGAAGGAAGGTGGCTCACAAAGGAGGAGACAGGCGAACAATGCTCCAAAGGCTCTGAAAGTGAGGAAACCTCGGAAGCCAAAGGCCAACGCCAATTCTTCTATTCAACGAGTGAAACCACCTAAGAGGACTATGGAGATAATCATAAATGGGATGGATATGGACATAGCTGGCCTCCCAATTCCTGTTTGCTCGTGCACTGGAACTCCTCAGCAGTGTTATCGATGGGGATGTGGTGGTTGGCAATCAGCTTGTTGCACAACTAATGTGTCTGTATATCCTTTACCTATGAGCACGAAAAGGCGTGGTGCAAGAATTGCTGGGCGGAAAATGAGTCAAGGTGCTTTTAAGAAGGTGCTGGAGAAACTTGCATCAGAAGGGTATAATTTTGCTGAACCCATTGATCTAAAGACTCATTGGGCTAGGCATGGTACCAACAAGTTTGTCACGATCAGGTAG 843 0.4496 MEDDALNIRNWGYYEPSFKGHLGLQLMSSMTDHDTKPYLSGRDPNILVNPNGTFHHRDYVVSGEQIPMNYMRDSWINQRDKFLNILPPNPSYPVLSETSGSGVHSLQNIQQRDISTDERVDRTEEPAVKKEGGSQRRRQANNAPKALKVRKPRKPKANANSSIQRVKPPKRTMEIIINGMDMDIAGLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSVYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASEGYNFAEPIDLKTHWARHGTNKFVTIR* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00793 280 MobiDBLite consensus disorder prediction 94 166 - -
Pte10g00793 280 MobiDBLite consensus disorder prediction 114 136 - -
Pte10g00793 280 Pfam GAGA binding protein-like family 1 280 IPR010409 -
Pte10g00793 280 SMART GAGA_bind_2 1 280 IPR010409 -
Pte10g00793 280 PANTHER - 1 280 IPR010409 -
Pte10g00793 280 MobiDBLite consensus disorder prediction 94 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00793 Pte-Chr10 10299267 10301615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00793 1 281 BBR or BPC Transcription factor family AT2G01930 57.191 1.42e-109 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pte10g00793 GAGA_bind 1.1e-104 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00793 - - qsa:O6P43_032408 455.677