Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00718 ATGAAACGGGAGTATCCCCAGCTTCCTCATCCCGCTTCCAACTCACTAGATCCAAGCATGATTGCTGGTTCAAGTGCCGGTGGAGCTTCTTCAAGGCACTCACTGACCACACCATCCGAAAATTTCCATGAAAAATCGAAACTTTGGGAACCAGGTGAGGCTCATCCGGATGCTGGTATGGATGAGCTTTTAGCTGTGCTTGGTTACAAGGTGAGGTCTTCTGACATGGCTCAAGTTGCCCAGAAGCTTGAACAGCTTGAAGAGGCTATGGTTAATGTTCAAGATGGTATTTCTCATCTTGGTTCGGAAACTGTTCATTACAATCCTTCTGATCTCTTAACCTGGGCTGAAACCATGATTTCTGAGCTTAACCCTTCTTCCAATTTTGACCGTATGGCTTTGGCTGCCCCTACTCTAGACGATACTCTGTTAGCTCCTGCTGAATCCTCTACCATAACCTCCATAGATTTCACTGACCAAAACAACAACCTTGCCTTCAATACTCATCAAGAACGCCTACTTTATGAGGAATCTTCTTCATCCGATTACGACCTTAAAGCTATTCCAGGTAAAGCCCTGTGTAGCCAAAATCACAAAGCTGATTCCTCTTCCTCCAGGAACATAAAAAGATTGAAATCGTCATCCGGGGCTGACCCAGAATTGTTTTCAGCCTCATCCATGATGGGTTTCAATGTTCCAGCTGAGTCAACTCGTTCTGTGGTCCTTGTGGACTCACAGGAGAATGGAGTTCGTTTGGTTCATGCTCTTATGGCATGTGCAGAAGCTGTTCAACTGAACAATATCAATGCAGCACAAGCACTTGTAAAGGAAATTGGATTCTTAGCAGTCTCACAAGCCGGTGCTATGAGAAAGGTTGCAACCTATTTTGCCGAAGCTCTTGCTCGTAGAATTTACAGGGTATGTCCTGAAAACCCAATTGACCATTCTCTATCAAATATGCTTCAAATGCATTTCTACGAGACTTGCCCGTATCTCAAATTTGCTCATTTCACTGCAAACCAAGCAATTCTTGAAGCATTTGAAGGTAAAAAACATGTTCATGTCATCGACTTCAGTATAAACCAAGGTATGCAGTGGCCTGCTCTTATGCAAGCTCTTGCTCTTAGACCCGGAGGTCCTCCATCTTTCAGGTTAACGGCTATCGGACCGCCAGCTTCAGACAATTCAGACCATCTTCAAGAAGTGGGATGGAAGTTAGCTCAATTTGCTGAGACCATTCATGTTCAGTTTGAATACAGAGGTTTTGTTGCCAATAGTTTAGCTGATCTGGATGCATCAATGCTTGAACTCGGGCCTAGTGAGATTGAGTCAGTAGCTGTTAACTCAGTTTTTGAGTTACACAAGTTATTAGCCAGACCTGGAGCTCTCGAGAATGTTTTGTCTGTTGTGAAACAAATCAAACCGGAGATCGTGACAATAGTTGAACAGGAAGCTAACCATAATGGGCCGGTTTTCTTAGACCGGTTCACTGAATCATTGCACTATTACTCAACCCTGTTTGATTCTTTAGAGGGAACTACGGTGAATACACAAGATATTGTTATGTCCGAAGTGTATTTGGGTAAGCAAATTTGTAATGTGGTGGCATGTGAAGGTCTAGACCGGATTGAAAGACATGAGACATTGGTTCAATGGAGAAACCGGTTGAATTCATCCGGGTTTGCACCGGTTCATTTAGGGTCTAATGCATTTAAGCAAGCTAGTATGTTGTTGGCACTGTTTACTGGTGGGGATGGGTACAGAGTGGAAGAGAACAATGGATGTCTGATGCTAGGCTGGCATACAAGACCACTCATTGCCACATCTGCTTGGAAACTTGGTCATAATACCATGGCTGCATATTGA 1866 0.4378 MKREYPQLPHPASNSLDPSMIAGSSAGGASSRHSLTTPSENFHEKSKLWEPGEAHPDAGMDELLAVLGYKVRSSDMAQVAQKLEQLEEAMVNVQDGISHLGSETVHYNPSDLLTWAETMISELNPSSNFDRMALAAPTLDDTLLAPAESSTITSIDFTDQNNNLAFNTHQERLLYEESSSSDYDLKAIPGKALCSQNHKADSSSSRNIKRLKSSSGADPELFSASSMMGFNVPAESTRSVVLVDSQENGVRLVHALMACAEAVQLNNINAAQALVKEIGFLAVSQAGAMRKVATYFAEALARRIYRVCPENPIDHSLSNMLQMHFYETCPYLKFAHFTANQAILEAFEGKKHVHVIDFSINQGMQWPALMQALALRPGGPPSFRLTAIGPPASDNSDHLQEVGWKLAQFAETIHVQFEYRGFVANSLADLDASMLELGPSEIESVAVNSVFELHKLLARPGALENVLSVVKQIKPEIVTIVEQEANHNGPVFLDRFTESLHYYSTLFDSLEGTTVNTQDIVMSEVYLGKQICNVVACEGLDRIERHETLVQWRNRLNSSGFAPVHLGSNAFKQASMLLALFTGGDGYRVEENNGCLMLGWHTRPLIATSAWKLGHNTMAAY* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00718 621 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 202 608 IPR005202 -
Pte10g00718 621 FunFam DELLA protein GAI 59 123 - -
Pte10g00718 621 Gene3D - 59 123 IPR038088 -
Pte10g00718 621 SMART DELLA_2 61 133 - -
Pte10g00718 621 MobiDBLite consensus disorder prediction 196 212 - -
Pte10g00718 621 MobiDBLite consensus disorder prediction 196 217 - -
Pte10g00718 621 Pfam Transcriptional regulator DELLA protein N terminal 61 127 IPR021914 -
Pte10g00718 621 Coils Coil 76 96 - -
Pte10g00718 621 MobiDBLite consensus disorder prediction 1 45 - -
Pte10g00718 621 MobiDBLite consensus disorder prediction 12 37 - -
Pte10g00718 621 Pfam GRAS domain family 252 612 IPR005202 -
Pte10g00718 621 ProSiteProfiles GRAS family profile. 243 612 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00718 Pte-Chr10 7812084 7814363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00718 61 622 GRAS Transcription Factor Family AT2G01570 68.675 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte10g00718 GRAS 1.8e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00718 K14494 - qsa:O6P43_032550 917.531