Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00650 ATGGAGAAGATACTGGAGCGTTACGAGAGATACTCCTTTGCTGAGAGGCAGCTGGCTGGAAACGATTGTGCCTCAGAGGGAAATTGGACAATGGAGTACTCCCGGCTTAAAGTCAAGGTAGAGCTTCTGCAAAGAAATCATAGGCATTATATGGGAGAAGATTTGGGCTCATTGAATCTCAAGGAGCTTCAGAGTCTGGAACAACAGCTAGATTCTTCTCTGAAGCACATTCGGATGCGTAAAAACCAACTCATGTATGAATCGATTTCCGAGCTGCAAAAAAAGGAGAAAGTGATTCAGGATCAGAATAGCTTATTAGCAAAGAAGATCAAGGAGAATGAAAAAGCCAAGGCTCAGCGACAAATTAACTGGGAGCAGCAAAACGAAGGCCCTAATCCAACTCCCTTCCTGCTTCCACAATCACTTCCTTTAAACATGGGTGGCAATTACCAAGAGGAAGCAGCTGATCATGCGAGGAGGAACCAGCTTGAACTCACTCTGGAACCTATATATTCATGCAACCTAGGATGCTTTGCTGCTTGA 543 0.4457 MEKILERYERYSFAERQLAGNDCASEGNWTMEYSRLKVKVELLQRNHRHYMGEDLGSLNLKELQSLEQQLDSSLKHIRMRKNQLMYESISELQKKEKVIQDQNSLLAKKIKENEKAKAQRQINWEQQNEGPNPTPFLLPQSLPLNMGGNYQEEAADHARRNQLELTLEPIYSCNLGCFAA* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00650 180 ProSiteProfiles K-box domain profile. 26 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pte10g00650 180 Coils Coil 99 128 - -
Pte10g00650 180 Pfam K-box region 26 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00650 Pte-Chr10 6359768 6361657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00650 1 181 MADS-box Gene Family AT1G69120 62.051 2.51e-71 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00650 K09264 - cave:132179115 253.832