Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00641 ATGAGAACAGGGAAGGCCAATCAAGAGGACGAGGAGTACGAGGAGGAAGAGCTAGTTCCTAAGAAGGAAGGAGCTTCTACGCCAGATAGCACTACTAATGCCAAAAATAACAATAAGGCTAGTGCAATTCGATCAAAACATTCAGTTACTGAGCAGCGGAGAAGGAGCAAAATAAATGAAAGATTCCAGATTTTGAGAAATCTCATACCTCACGGTGATCAGAAGAGAGACACAGCATCATTCTTATTAGAGGTGATTGAATATGTACAATATTTGCAGGAGAAAGTGCAAAAGTATGAGGGCTCTTATCAAGGGTTGACTTTGGAGCCTACAAAATTGGTGCCATGGAGAAATAGCCACTGGCGTGTTCCAAGTTTTGTTGGTCAACCTCAAACCGTAAAGAATGGTCTTGGTCCAGTGTCGTCTTTTCCTGGAAAGTTCGACGATAATACCACCACTAGTACACCTTCAATTAGTACCAGCACTCAGAATGCTATGGATTCGGATCATAGCATGGATATTGCCTGCAAACCAGAGGAGAGGCAACCAGAGATAGCAAACAAAGGAATACCTCTTACCATGCCTCACCAAATACACGTGGCTGGTATGGTCAGAGGTGACTGTGTTCTTGACCATCCACTACAGGGCCCTGTCTGTGATGCACAGTCATCTGCAAGTGAACTGCTACACCAGGAAGAACTGTCGATTGAAGGTGGTACTATAAGCATATCAAGTGCATACTCTGAAGGGATAACCAAAAGCCCTATTCCAACAATCAAGCTATGGGATATACAAGAGATATGGGCATTGGAGAGGATTATGATATAG 828 0.4348 MRTGKANQEDEEYEEEELVPKKEGASTPDSTTNAKNNNKASAIRSKHSVTEQRRRSKINERFQILRNLIPHGDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGLTLEPTKLVPWRNSHWRVPSFVGQPQTVKNGLGPVSSFPGKFDDNTTTSTPSISTSTQNAMDSDHSMDIACKPEERQPEIANKGIPLTMPHQIHVAGMVRGDCVLDHPLQGPVCDAQSSASELLHQEELSIEGGTISISSAYSEGITKSPIPTIKLWDIQEIWALERIMI* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00641 275 Gene3D - 38 112 IPR036638 GO:0046983
Pte10g00641 275 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 42 92 IPR011598 GO:0046983
Pte10g00641 275 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 5 252 IPR044295 GO:0003700|GO:0006351|GO:0046983
Pte10g00641 275 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 40 113 IPR036638 GO:0046983
Pte10g00641 275 CDD bHLH_AtBIM_like 41 117 - -
Pte10g00641 275 MobiDBLite consensus disorder prediction 25 45 - -
Pte10g00641 275 FunFam BHLH domain class transcription factor 40 112 - -
Pte10g00641 275 Pfam Helix-loop-helix DNA-binding domain 44 93 IPR011598 GO:0046983
Pte10g00641 275 MobiDBLite consensus disorder prediction 1 55 - -
Pte10g00641 275 MobiDBLite consensus disorder prediction 149 169 - -
Pte10g00641 275 SMART finulus 48 98 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00641 Pte-Chr10 6237050 6240970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00641 1 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 57.588 5.84e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte10g00641 HLH 8.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00641 - - qsu:112028766 320.472