Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00635 ATGGGTGGGAAAGATGATCATGAGCTAGGCTCCATAAATGAAGATCCTATGAACTATTCACCCGGTATGACCTCAGATTGGAGATATGGAGGTGCTAGTCTTACTGATTCATCTATGGGGTTAGTTCCGTTGTTAAATTCAGTGGCTGTGATTAAGGAAGATTTTTCTGGTTCTTCTTCATATCCCTCTGCTTCAATCGATTCCTTCGGTCCAACCTTTTGGGACCACCCAATGAATCCGCAAAACTTGGGGTTTGGTGGCACCAATGTCCACATTAATGCCAGCGCTTCGAGCATGATAGGCATCAGAAAGGCAGAAACTCCCTTTCCTATTACAGGTAATGATAGTACGCCAGAAACGGGTTGGAGTCCAACAAGTTCGTTATTGAAAGGAAGTGTTTTGTTACCAACTGGACCAATAATGCTCCCTCAGAGTTTGTCTCAAATTCCAACTGATTCTGCATTTATTGAGCGTGCTGCAAGATTCTCTTGTTTTAGTGGTGGTAACTTCAGTGATGTGGTCAACGCTTTCAGCATTCCTCAACCTTTAAGCATTTCTTATAGAAGTATAGGCTTGATGCATGGTGCTCAGGAGCTTGCTGGCGACAATTTGAGACCAGCATGTGAAGGACAATCCAAAAAGAAAGACCTGAATGTGGATGATGCTACAAAAGATGCGTCCTTGTCTGATGATCATCAGGATGTTGGGAAGAGTTCACTCAAGACAGATAGAAGAAGCGAGAGTCTGGTAAGGTCTAATGATGGGGAAAAACAAAGTGCTGATGGATCAGGTAATGAGTCTGATGAAGCAGAATTCAGTGGTGGTGTTAATGTTGAAGATGATTCTTCCATGTTGGAGGGTACAGGTCATGAACATTCCACAAAAGTGAAAAACTCAAAGAAAAGAAAGAGAGTTGGACAGGAATCCCAAAAGAATCACGTCTACGGAACTCCACAACGTCGAATTGGAGCTCCTAAAGATAATCCTGAGAATCAACAGAAGGGAAATCAGAAGGCAGCTTCAACTTCTAACAAAACTAATGTAAAGCATGGCAAACAAGGGTCTCAAGCTTCTGATAATCCGAAGGAGGAATATATACATGTTAGAGCTCGGAGGGGGCAAGCAACAAATAGTCATAGCCTTGCTGAAAGAGTAAGGAGGGAAAAAATCAGTGAAAGGATGAAATTCCTTCAAGACCTTGTTCCTGGTTGCAGCAAGGTCACTGGTAAGGCAGTGATGCTTGATGAAATTATTAACTATGTCCAATCTCTTCAACGACAGGTTGAGTTTTTGTCTATGAAACTTGCAACAGTAAATCCGCGTCTGGATTTTAACATTGAAGGGCTGTTGGCGAAAGATCATCGTGCTGGTACTTCATCCACACTGGGGTTTTCTCATGACATTTCGATGATTTATCCTCCTGTCCATCCTGCACATTCAGGAATGGTTCAGGAGGGTATAACTGCTATTTCAACATCTTCTGACATACTTAGGAGCACCATCAATCCTCAACTGACACCTCTTGCTGGAGGATATAAAGAGCATACCTAG 1551 0.4262 MGGKDDHELGSINEDPMNYSPGMTSDWRYGGASLTDSSMGLVPLLNSVAVIKEDFSGSSSYPSASIDSFGPTFWDHPMNPQNLGFGGTNVHINASASSMIGIRKAETPFPITGNDSTPETGWSPTSSLLKGSVLLPTGPIMLPQSLSQIPTDSAFIERAARFSCFSGGNFSDVVNAFSIPQPLSISYRSIGLMHGAQELAGDNLRPACEGQSKKKDLNVDDATKDASLSDDHQDVGKSSLKTDRRSESLVRSNDGEKQSADGSGNESDEAEFSGGVNVEDDSSMLEGTGHEHSTKVKNSKKRKRVGQESQKNHVYGTPQRRIGAPKDNPENQQKGNQKAASTSNKTNVKHGKQGSQASDNPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDHRAGTSSTLGFSHDISMIYPPVHPAHSGMVQEGITAISTSSDILRSTINPQLTPLAGGYKEHT* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00635 516 MobiDBLite consensus disorder prediction 1 21 - -
Pte10g00635 516 Pfam Helix-loop-helix DNA-binding domain 377 425 IPR011598 GO:0046983
Pte10g00635 516 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 372 443 IPR036638 GO:0046983
Pte10g00635 516 MobiDBLite consensus disorder prediction 329 360 - -
Pte10g00635 516 MobiDBLite consensus disorder prediction 208 254 - -
Pte10g00635 516 SMART finulus 380 430 IPR011598 GO:0046983
Pte10g00635 516 Gene3D - 371 444 IPR036638 GO:0046983
Pte10g00635 516 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 374 424 IPR011598 GO:0046983
Pte10g00635 516 FunFam Basic helix-loop-helix transcription factor 371 443 - -
Pte10g00635 516 CDD bHLH_AtBPE_like 364 449 - -
Pte10g00635 516 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 256 475 IPR024097 GO:0006355
Pte10g00635 516 MobiDBLite consensus disorder prediction 206 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00635 Pte-Chr10 6145441 6149612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00635 58 515 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 46.652 6.69e-107 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte10g00635 HLH 6.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00635 - - zju:107429134 588.956