Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00621 GAAATTTGCCTTGGTAACCTAAAGAAGTTCCACTTCAGAGAACTTCAGGTTGCTACAAACAACTTCAGCAGTAAAAACTTCATTGGTAAAGGTGGATTTGGCAATGTCTACAAAGGATACCTACAAGATGGCACTGTTGTTGCAGTCAAAAGGCTTAAAGATGGAAATGAGTCTGGGGGTGAAATCCAATTTCAGACTGAAGTTGAGATGATCAGCTTAGCAGTGCACCGACACCTCCTCCGGCTTTATGGCTTCTGCATGACTGCTACGGAGAGGCTTCTAGTTTACCCTTACATGCCTAATGGAAGCGTTGCTTCTCGGCTTAAAGGCAATTTTCTATTTATAGCCAAACCTGCTCTGGACTGGGTTACAAGAAAGAGGATAGCCTTGGGAGCTGCAAGAGGGTTGTTGTATTTGCATGAGCAGTGTGACCCAAAGATAATCCACCGGGATGTAAAGGCTGCAAATATTTTGCTTGATGAATATTGTGAGCCTGTAGTGGGAGATTTTGGATTGGCAAAACTATTAGATCACCGTGATTCACATGTGACAACAGCTGTGAGAGGCACAGTGGGGCATATAGCTCCTGAGTACCTCTCAACAGGGCAGTCCTCCGAGAAAACAGATGTATTTGGTTTTGGAATCCTCCTCCTTGAATTGATATCTGGACAAAGAGCTCTTGAATTTGGAAAGACGGCCAACCAGAAAGGAGTCATGCTTGATTGGGTGAAGAAAATTCACCAAGAAAAGAAACTTGACATGCTAGTTGACAAGGACCTGAAGAACAATTATGATCGAATTGAGCTAGAAGAAATGGTTCAAGTAGCTTTATTATGTACCCAATATCTTCCAAACCACAGGCCAAAGATGTCGGAAGTGGTGCGCATGCTTGAA 894 0.4329 EICLGNLKKFHFRELQVATNNFSSKNFIGKGGFGNVYKGYLQDGTVVAVKRLKDGNESGGEIQFQTEVEMISLAVHRHLLRLYGFCMTATERLLVYPYMPNGSVASRLKGNFLFIAKPALDWVTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYCEPVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKTANQKGVMLDWVKKIHQEKKLDMLVDKDLKNNYDRIELEEMVQVALLCTQYLPNHRPKMSEVVRMLE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00621 298 SMART serkin_6 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00621 298 ProSiteProfiles Protein kinase domain profile. 22 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00621 298 Gene3D Transferase(Phosphotransferase) domain 1 99 298 - -
Pte10g00621 298 Pfam Protein kinase domain 23 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00621 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Pte10g00621 298 PIRSF ILK 5 298 - -
Pte10g00621 298 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 297 - -
Pte10g00621 298 ProSitePatterns Protein kinases ATP-binding region signature. 28 50 IPR017441 GO:0005524
Pte10g00621 298 SUPERFAMILY Protein kinase-like (PK-like) 6 297 IPR011009 -
Pte10g00621 298 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Pte10g00621 298 FunFam Somatic embryogenesis receptor-like kinase 1 99 298 - -
Pte10g00621 298 FunFam Somatic embryogenesis receptor kinase 1 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00621 Pte-Chr10 5757044 5758297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00621 1 298 Receptor kinase-like Gene Family AT5G16000 83.333 0.0 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pte10g00621 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00621 - - gmx:100790194 544.273