Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00604 ATGGGGCGCGGCAGAAAGAAAATACATCTGAGCAAGATCTATTCACTTACATGTGGTAAAGCGTCAATTCAAGGTGACCATACACAGATTGGTAGGAAAGGTTTTTCAAGAGTTGTTTACTGCAATGATCCAGGGTGCTTTGAAGCGGGAATTCTCAATTATCCTGATAACTATATCAGTTCTACTAAATATACTCTTGCTACTTTCTTACCAAAGTCTTTGTTTGAGCAGTTTAGGCGAGTGGCCAATTTTTACTTTCTAGTCACTGGTACCTTGGCCTTCACCAAACTTGCTCCATATACAGCTGTCAGTGCTATTGTTCCTCTGATAGTTGTCATTGGAGCAACTATGGTAAAAGAAGGTATCGAGGATTGGAGAAGGAAAAGGCAGGACATCGAGGTCAACAATAGGCAAGTTAAAATGCATAGAGGTGAGGGCGTATTCAACTATACGGAATGGAAGAATCTGAGGGTGGGAGATGTAGTGAAGGTCGAGAAAGACGAATTCTTTCCTGCAGACCTTGTCTTGCTATCATCCAGTTACGAGGATGCAATCTGCTATGTTGAAACTATGAACTTGGATGGGGAGACAAATTTAAAAGTAAAGCAAGGATTGGAGGTAACATCTTTCTTACATGAGGAGTCCGACTTGCGTGATTTCAAAGCCCTTGTCAAATGTGAAGACCCCAATGCCAATTTGTACTCTTTTGTGGGAACAATGGAATTTGAAGAGCAAAAATATCCCCTCTCACCTCAACATCTACTCCTTAGAGATTCCAAACTCAGAAACACGGACTACATATATGGAGCTGTCATCTTTACTGGTCCTGAGACTAAGGTTATTCAAAATTCTACTGATCCACCATCGAAGAGAAGCAAGATTGAGAAAAAGATGGATAGAATAATCTATTTCTTGTTCTGTATTCTGTTTCTAATTGCATTTGTGGGATCTATTTTCTTTGGTATTGCTACTAAAGATGACCTAGGAAATGGAACCATGAAAAGGTGGTATTTAAGACCGGATGATTCCACAGTTTTCTTCGATCCTAAAAGAGCAACTACAGCTGCATTTTATCACTTTCTGACAACCCTCATGTTGTTTGGGTTCTTTATTCCAATCTCCTTGTATGTTTCCATAGAAATTGTGAAAGTCCTTCAGAGCATTTTCATTAACCAAGATATTCATATGTATTATGAGGAAGCTGACAAACCAGCTCATGCCCGTACGTCAAACTTGAATGAGGAACTTGGTCAAGTTGATACAATACTTTCTGATAAGACAGGGACTCTTACCTGCAATTCCATGGAGTTCATTAAATGCTCTATTGCTGGGGTAGCTTATGGCCGTGGAGTTACAGAGGTTGACAGGGTTATGGGCCAAAAGAAGGGTTCAGGCTTTGTTAATGCTCATGTCAATGGCACCATAGCAACAAAGCCACCAATCAAAGGCTTTAATTTTACAGACAAAAGAATAATGGGTGGAAATTGGGTTAATGAGCCTCGTGCAGATGTGATTCAGAAGTTTTTGCGTTTGTTAGCAATTTGTCATACAGCTATACCTGAAGTGGATGAAGACACAGGAAAAGTCTCTTATGAGGCTGAGTCACCTGATGAAGCAGCATTTGTGATTGCGGCAAGAAAGCTTGGCTTTGAGTTCTATCAACGAACACAAACAAGTGTATCATTGCATGAATTAGATCCAGTTTCTGGAGAGAAAGTTGAAAGGACTTATAAACTTCTCAATGTGTTAGAGTTCAATAGTGCAAGAAAGCGAATGTCTGTGATAGTAAAAGACGAGGATGGAAAAGTACTGATACTCTGTAAAGGCGCTGACAGTGTGATGTTTGAAAGGATTGCCAAAAGTGGAAGAGAATTTGAGGAGAAGACCAGGAAGCATATAAATGAATATGCTGATGCGGGTTTAAGAACTTTAATACTTGCCTATCGCGAACTTTCTGAAGAGGAGTACAGAGAGTTCGATGAGAAATTCTCTGCTGCCAGGAATTCTGTTAGTGCAGACAGAGACCAAATGATTGATGAACTGGCAGAGAAAGTTGAAACGGACCTGATACTTCTAGGAGCAACTGCTGTAGAGGACAAGCTCCAAGATGGGGTCCCTGACTGCATTGACAAGCTTGCTCAAGCAGGTATTAAAATATGGGTACTGACCGGTGACAAAATGGAGACTGCCATCAACATCGGCTTTGCATGCAGTTTGCTCAGACAAGGGATGCGGCAAATCCTTATCACTTTGGACAACCCAGAAATTGGAGCTTTGGAAAATGCAGGGGAAAAATCTGCTATCTTCGAGGCATCATATGAAAGTGTTGGCCGTCAGATATCTGAAGGGATTGCTCAGGTTCAATCTAACGTCACTTCTGATCCATTTGCTCTAATCATTGATGGAAAGTCACTAACTTATGCATTAGAGGATGAAATGAAGAACATGTTTCTGGAACTTGCGGTGCATTGTGCATCTGTTATTTGCTGTCGATCTTCACCAAAACAAAAGGCACTGGTTACAAGATTGGTAAAATCTGGAACTGGTAAGACAACATTAGCAATTGGTGATGGAGCCAATGATGTGGGCATGCTTCAAGAAGCAGATATAGGTGTGGGAATAAGCGGCGTTGAAGGAATGCAGGCCGTCATGTCTAGTGACATTGCAATTGCTCAGTTCCGGTACTTAGAGCGACTTCTCCTTGTGCATGGACATTGGTGTTACAGAAGGATATCATCCATGATATGCTACTTTTTCTACAAGAACATCACATTTGGTTTCACTCTATTCTTGTACGAGGTTTATGCCTCATTCTCTGGAACACCTGCATACAACGACTGGTTTCTGTCACTTTATAATGTATTCTTCTCATCACTTCCTGTCATTGCCATGGGGGTATTTGACCAGGATGTATCTGCCCGATTCTGTCTCAAGTTTCCCCAATTGTATCAAGAAGGAGTACAAAATGTACTTTTCTCCTGGCGTCGTATTCTTGGCTGGATGTTAAATGGATTTATCAGTGCCATAATTATTTTCTTCTTCTGCACTAAAGCAATGGAAATCCAGGCCTTTGATCACGGTGGAAACACTGCTGGAAGAGATATATTAGGGGCTACAATGTATACTTGTGTAGTTTGGGTCGTTAACTTGCAGATGGCACTTTCTATTAGCTATTTCACCTTAATACAACATATTCTCATCTGGGGTACTATTTCGTTCTGGTACCTTTTCAACCTCATTTATGGAGCTATTCCTACAAAAATCTCTGGCAATGCTTTTCATGTTTTCAACGAAACACTTGCCCCCTCCATTTCTTATTGGCTTGTCACCCTGTTTGTGGTGATCTCCTCCCTAACGCCGTCCTTCTCATATTCGGCAATTCAGATGCGTTTCTTTCCAATGTACCACGAGATGGTACAATGGATAAGGCATGAAGGGCATCTAGACAATCCTGCATACTCTAACTTGGTCCGGCAGAAATCAGCACGACTAAGTTCTGTGGGTTCTACATCACGCCTGGCAGCAAAATCCGGCCGCTTGAAAGATATGTTTGTTGTAGAGGTTTGA 3567 0.413 MGRGRKKIHLSKIYSLTCGKASIQGDHTQIGRKGFSRVVYCNDPGCFEAGILNYPDNYISSTKYTLATFLPKSLFEQFRRVANFYFLVTGTLAFTKLAPYTAVSAIVPLIVVIGATMVKEGIEDWRRKRQDIEVNNRQVKMHRGEGVFNYTEWKNLRVGDVVKVEKDEFFPADLVLLSSSYEDAICYVETMNLDGETNLKVKQGLEVTSFLHEESDLRDFKALVKCEDPNANLYSFVGTMEFEEQKYPLSPQHLLLRDSKLRNTDYIYGAVIFTGPETKVIQNSTDPPSKRSKIEKKMDRIIYFLFCILFLIAFVGSIFFGIATKDDLGNGTMKRWYLRPDDSTVFFDPKRATTAAFYHFLTTLMLFGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVDRVMGQKKGSGFVNAHVNGTIATKPPIKGFNFTDKRIMGGNWVNEPRADVIQKFLRLLAICHTAIPEVDEDTGKVSYEAESPDEAAFVIAARKLGFEFYQRTQTSVSLHELDPVSGEKVERTYKLLNVLEFNSARKRMSVIVKDEDGKVLILCKGADSVMFERIAKSGREFEEKTRKHINEYADAGLRTLILAYRELSEEEYREFDEKFSAARNSVSADRDQMIDELAEKVETDLILLGATAVEDKLQDGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMRQILITLDNPEIGALENAGEKSAIFEASYESVGRQISEGIAQVQSNVTSDPFALIIDGKSLTYALEDEMKNMFLELAVHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGTPAYNDWFLSLYNVFFSSLPVIAMGVFDQDVSARFCLKFPQLYQEGVQNVLFSWRRILGWMLNGFISAIIIFFFCTKAMEIQAFDHGGNTAGRDILGATMYTCVVWVVNLQMALSISYFTLIQHILIWGTISFWYLFNLIYGAIPTKISGNAFHVFNETLAPSISYWLVTLFVVISSLTPSFSYSAIQMRFFPMYHEMVQWIRHEGHLDNPAYSNLVRQKSARLSSVGSTSRLAAKSGRLKDMFVVEV* 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00604 1188 Pfam Phospholipid-translocating P-type ATPase C-terminal 883 1133 IPR032630 -
Pte10g00604 1188 CDD P-type_ATPase_APLT_Dnf-like 56 1004 - -
Pte10g00604 1188 Pfam Phospholipid-translocating ATPase N-terminal 39 105 IPR032631 -
Pte10g00604 1188 SFLD p-type atpase 405 906 IPR044492 -
Pte10g00604 1188 NCBIfam phospholipid-translocating P-type ATPase 54 1140 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pte10g00604 1188 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1133 IPR023298 -
Pte10g00604 1188 FunFam Phospholipid-transporting ATPase 115 285 - -
Pte10g00604 1188 NCBIfam HAD-IC family P-type ATPase 825 938 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte10g00604 1188 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Pte10g00604 1188 Gene3D - 535 691 IPR023299 GO:0000166
Pte10g00604 1188 FunFam Phospholipid-transporting ATPase 692 895 - -
Pte10g00604 1188 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 430 694 IPR023299 GO:0000166
Pte10g00604 1188 Gene3D - 115 285 - -
Pte10g00604 1188 Pfam Cation transport ATPase (P-type) 525 617 - -
Pte10g00604 1188 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 35 1144 - -
Pte10g00604 1188 SFLD C1.7: P-type atpase like 405 906 - -
Pte10g00604 1188 SUPERFAMILY HAD-like 418 910 IPR036412 -
Pte10g00604 1188 FunFam Phospholipid-transporting ATPase 534 692 - -
Pte10g00604 1188 Gene3D - 692 895 IPR023214 -
Pte10g00604 1188 PRINTS P-type cation-transporting ATPase superfamily signature 742 752 - -
Pte10g00604 1188 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Pte10g00604 1188 PRINTS P-type cation-transporting ATPase superfamily signature 855 874 - -
Pte10g00604 1188 SUPERFAMILY Calcium ATPase, transduction domain A 140 282 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00604 Pte-Chr10 5585726 5592202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00604 8 1176 Primary Pumps ATPases AT1G68710 73.339 0.0 1862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00604 K01530 - qsa:O6P43_025645 1962.19