Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00596 ATGATGCCCCCTGATCAAGAAACTGGATCCCTCAACACCATGATATCAAATATCCCAGTCACAAACCGATCTGACAACAGTACTTCTGTGCATGCCGAACCATCTGATTCTAGTAGCAGTGATGACAACATACTCAATTCAGATAATATCAATAGCACTCCCCATCAACAACAACAACCCTCAACAAGATTCTCCATTCTCCATAAATCCTTACGTCCTGTTTCCCTAAAGTTTGTAGATGTTACATACAGCATAAACTTGGGAACCACAAAGACTGGATGCTTCTCCTCAAATGAACCAAAACTGACTAGAAACATACTGAATGGTGTGACCGGAATGGTTCAGCCTGGTGAGCTACTAGCAATGTTGGGGCCGTCGGGCAGTGGCAAGACCACATTGCTTACTGCATTAGCCGGCCGTTTAACTGGAAAGTTTTCCGGAAGTGTAACTTACAATGGACATCCTTTCTCAAGCTCAATGAAACGAAAGACTGGTTTTGTCACACAGGACGATGTGTTATATCCTCACCTCACCGTACTTGAAACATTGAAATATGCAGCCTTGTTAAGACTCCCCAAGGACCTTAGCAAAGAGGAGAAAATTGACCAAGCTGAGTCAGTCATTGTTGAGCTTGGACTAACTAGATGCAGAAATAGTCCCATAGGTGGCGGTGGTGCTTTGTTTAGGGGTATATCCGGTGGTGAACGGAAGCGGGTCAGTATTGGGCATGAAATGTTGGTTAACCCAAGTTTGTTATTGTTGGATGAACCTACATCTGGCCTGGACTCAACAACCGCAGCGAGAATTGTCGCCATGTTGCGGGGCCTTGCACGTGGCGGCCGGACAGTCATCACAACCATTCATCAGCCTTCAAGTAGGTTGTACCTGATGTTTGACAAGGTGGTGGTGCTAGCAGACGGGTACCCAATATATAGTGGGCAAGCGGGTCGGGCAATGGAATATTTCGGTTGCATAGGTTTTATGCCCGGCTTGAATTTTATCAACCCAGCCGATTTTCTACTTGACTTGGCCAACGGTATAGCTCCTGACGCAAAACAAGATGATCCACTTGAGATGTATGCAAGACTGGAACATCATGATAATCAAGCTTCAACAAAACAATTTCTTGTTTCTTGTTATAGAAAGAATCTGTGTCCTGCTCTAAGAGCTGAGATCAACAATAGAGAAAGAGAACACCTTGCTTTCACATTTGGAGCATCTTTGTCTAGAAGTTCTGAAAATCAATGGACAACAACTTGGTGGGAACAATTCAACGTACTGCTCAAGAGGAGCTTACGAGAGAGGAGGCATGAATCTTATTCTGGTTTGAGGATTTTTCAAGTCATTTCTGTCTCATTTCTGTCAGGACTTCTCTGGTGGCATTCTGATGTCTCACATTTACAAGATCAGGTGAGCCTACTGTTTTTCTTCTCAATCTTCTGGGGTTTCTTCCCTTTCTTCAGTGCCATTTTCACATTTCCAACGGAGAAGCCAATGCTCACGAAGGAGCAATCTTCTAGCATGTATCATCTGTCATCCTACTACTTCGCCAGAATGGTGGGAGATTTGCCAATGGAGCTTGTACTCCCCACCATTTTTGTTACCATCACATATTGGATGGGAGGTCTCAAGCCAACGCCATTTGCTTTCATTTCCACTCTCGCTATCATCCAGGTTAACGTGCTTGTCGCTCAAGGAATCGGCCTAGCACTAGGTGCCATACTCATGGATCTAAAGAAAGCAACGACCTTAGCTTCTGTCATCATGTTAGTGTTTTTATTAGCTGGTGGATACTATGTTCAGCATATGCCATCTTTCATAGTCTGGTTGAAGTACATATCTTTCAGTCACTATTGCTACAAACTTCTAGTAGGAGTGCAGTACTCAGGAGATGAAGTTTACGATTGTGGACTAGAATTGCGTTGTAGGGTAATGGATTTTCCTGCAATGAAAAATCTGGGGCTTGATAATATGTGCGGGGATGTTGCGGCACTGACTGTAATGTTGATAGGATATAGAGTTCTGGCCTATGTAGCATTGAGGATTGGACTGCTACGCTGA 2061 0.4401 MMPPDQETGSLNTMISNIPVTNRSDNSTSVHAEPSDSSSSDDNILNSDNINSTPHQQQQPSTRFSILHKSLRPVSLKFVDVTYSINLGTTKTGCFSSNEPKLTRNILNGVTGMVQPGELLAMLGPSGSGKTTLLTALAGRLTGKFSGSVTYNGHPFSSSMKRKTGFVTQDDVLYPHLTVLETLKYAALLRLPKDLSKEEKIDQAESVIVELGLTRCRNSPIGGGGALFRGISGGERKRVSIGHEMLVNPSLLLLDEPTSGLDSTTAARIVAMLRGLARGGRTVITTIHQPSSRLYLMFDKVVVLADGYPIYSGQAGRAMEYFGCIGFMPGLNFINPADFLLDLANGIAPDAKQDDPLEMYARLEHHDNQASTKQFLVSCYRKNLCPALRAEINNREREHLAFTFGASLSRSSENQWTTTWWEQFNVLLKRSLRERRHESYSGLRIFQVISVSFLSGLLWWHSDVSHLQDQVSLLFFFSIFWGFFPFFSAIFTFPTEKPMLTKEQSSSMYHLSSYYFARMVGDLPMELVLPTIFVTITYWMGGLKPTPFAFISTLAIIQVNVLVAQGIGLALGAILMDLKKATTLASVIMLVFLLAGGYYVQHMPSFIVWLKYISFSHYCYKLLVGVQYSGDEVYDCGLELRCRVMDFPAMKNLGLDNMCGDVAALTVMLIGYRVLAYVALRIGLLR* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00596 686 CDD ABCG_EPDR 73 313 - -
Pte10g00596 686 Pfam ABC transporter 107 259 IPR003439 GO:0005524
Pte10g00596 686 Pfam ABC-2 type transporter 422 628 IPR013525 GO:0016020|GO:0140359
Pte10g00596 686 FunFam ABC transporter G family member 22 94 325 - -
Pte10g00596 686 Gene3D - 94 323 IPR027417 -
Pte10g00596 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 327 IPR027417 -
Pte10g00596 686 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 331 IPR003439 GO:0005524
Pte10g00596 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 31 676 - -
Pte10g00596 686 SMART AAA_5 116 309 IPR003593 GO:0016887
Pte10g00596 686 MobiDBLite consensus disorder prediction 1 62 - -
Pte10g00596 686 Pfam ABC-2 type transporter 288 350 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00596 Pte-Chr10 5470817 5474883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00596 105 307 Calmodulin-binding Proteins AT2G36910 29.858 3.74e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00596 K05681 - qsa:O6P43_025652 973.385