Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00586 ATGTTCTCTTGTAGCAGCGGCGAATATCCTTATCCATTCGTAGGCCAGACATTGACAAATAGTGATTACCGAATGTCTCAGAGTCACCAGCAAAATCTGCCATCCTATAGTTCCAATTTTGCAGACCCTTTCTTTGAAGATGACGACCTATTTTTGAACTATTTGTTAACTCATCATCACCTGTTGGCTGGCAACACTTCTGAAGATCCCACTGATAGCATTGCAGCTTCGAATATTGCGGCAGACACAAATAATGAGAGTAATAATGATGCTGAGGTTGAGAGGGAAATTTCTGTGAAATCAAGTTCAAAAAGAAAGGGGAAAACTGTGAAACAGACAATACCAAGGAAGAGGAGTGGAAAGGACAGACACAGCAAGATTTGCACAGCTCAAGGCACAAGAGACCGTAGGATGAGGCTATCCCTTCCAGTTGCTCGTAAGTTTTTTGATCTTCAAGACTTGTTAGGATTTGATAAAGCAAGCAAAACCATTGAGTGGCTCTTTAGCAAGTCAAAGGCAGCAATTAAAGAACTGGAGCAAAATATCTTAAAAATGAAGCAATATACCTTGATTGCTGCGAAGAGTTTGTCATCAACAACTGAAAGTGAAGTTGTTTCCAGGGCTGGGGAGGCTGCTGAAAGTAGTGACTTCAACAAATTCGCCGGCTACCTGAAGGAGAAAAAGAGCAGAAAGCTACACAATGTTGCGAAGGAATCAAGGGACAAGGCGAGAGCTAGGGCAAGAGTGAGAACAAGGGAAAAAATGGTTTTGAAAGGGATGGAAGTGTCGCCAAAAGAAGGATCCAAAGTGGAGCCTTCAGGAGAAACATCTATTGACAACCAAGAGACGATTATCACGCTGAAGACAAGACCCGGTGGAGAAGAAGAATCTAGTAACCATGGCTTTCTAGAACATCAAATGAATTCTGTAAACATTCATGAGAAGGATTTGAATTATTTGTTATTACCATCGTCTGCATTTGAGTTTGACCATATGGAAATGCAGTTCCCTCATTGCATAGTACCACAGATGAAGACGCTACTAGCAGCTAATGACCAGGGCCACCCTAGTGGAGTTATCAATCATTTGAAGTTACAGACAAGCCAAGCCTATCTCCCTTCGTAA 1125 0.4196 MFSCSSGEYPYPFVGQTLTNSDYRMSQSHQQNLPSYSSNFADPFFEDDDLFLNYLLTHHHLLAGNTSEDPTDSIAASNIAADTNNESNNDAEVEREISVKSSSKRKGKTVKQTIPRKRSGKDRHSKICTAQGTRDRRMRLSLPVARKFFDLQDLLGFDKASKTIEWLFSKSKAAIKELEQNILKMKQYTLIAAKSLSSTTESEVVSRAGEAAESSDFNKFAGYLKEKKSRKLHNVAKESRDKARARARVRTREKMVLKGMEVSPKEGSKVEPSGETSIDNQETIITLKTRPGGEEESSNHGFLEHQMNSVNIHEKDLNYLLLPSSAFEFDHMEMQFPHCIVPQMKTLLAANDQGHPSGVINHLKLQTSQAYLPS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00586 374 ProSiteProfiles R domain profile. 237 254 IPR017888 -
Pte10g00586 374 ProSiteProfiles TCP domain profile. 120 178 IPR017887 -
Pte10g00586 374 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 76 279 IPR005333 GO:0003700
Pte10g00586 374 Pfam TCP family transcription factor 119 255 IPR017887 -
Pte10g00586 374 MobiDBLite consensus disorder prediction 88 103 - -
Pte10g00586 374 MobiDBLite consensus disorder prediction 81 125 - -
Pte10g00586 374 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00586 Pte-Chr10 5398907 5400031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00586 39 317 TCP Transcription Factor Family AT1G68800 36.934 3.19e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte10g00586 TCP 1.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00586 - - jre:108993274 238.81