Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00585 ATGTGTGGAAAGAAAGAAGAAGAAGAAGAAGAAATACAGTTTTCTCAAGCTACCAATAACTTCCAAAGCTCCCAGGAACATCAATATCTTCATCAGCAACAGCAGCAAATGATGCAGCAACAGGAACAAAACAATGACCCTAATATCTTTGCAGGTGGGAGAGGATTGATTTTTAATGAGGTTTCTCCAACCTTACAACCTTGGTCATTGCCTACTATGAACACCTTCAACCAGGCTAACTTTGCCGCCAACCCGGTCAGAGAGCACGCACATGATCCATTTCTTGTTCCTCCACCACCTCCATATGCATCATCATATGCAAGCTTGTTAAATCGGAGAGTTCCCTCTCTGCAGTTTGCATATGATGGTTCGTCTTCTGACCATCTTAGGATAATATCAGACGCACTTGGACCTGTGATCCAACCAGGTTCCGCTCCCTTTGGTCTCGAAGCTGAGCTGAGCAAAATCGCTGCTCAAGAAATCATGGATGCAAAAGCCTTGGCAGCATCAAAGAGCCACAGTGAAGCCGAAAGGAGACGAAGAGAAAGAATCAATAACCATCTTGCTAAACTTCGCAGCTTATTACCCAGTACAACCAAAACAGACAAAGCATCATTGCTAGCGGAAGTGATTCTGCATGTGAAGGAACTTAAGCATCAAACTTCATTGATAGCAGAAACAAGTCCTGTCCCAACTGAGTTGGATGAGCTAATCGTTGATGCAGCTGACGAGGATGGCAAGTTTGTCATCAAAGCCTCACTGTGTTGCGAGGACAGAACTGACCTTTTACCTGACCTCATCAAGACTTTGAAAACTTTACGCTTAAGAACCCTCAAAGCTGAGATAACAACTCTAGGAGGACGTGTTAAGAACGTGTTGTTTATTACTGGTGAAGATGATCCATTTAGCAATAATAATGATGGTGAAAAAAGCCAGAAGCAATATTGTATTAGCTCCATACAAGAAGCCCTCAAAGCAGTGATGGAGAAGGCTTCTGGTGATGAGTCTTCTTCTGGTTGCGTTAAGAGGCAAAGGACTGCTAATGTAAATGTCATCGAACACAGGTCTTCATAA 1074 0.4311 MCGKKEEEEEEIQFSQATNNFQSSQEHQYLHQQQQQMMQQQEQNNDPNIFAGGRGLIFNEVSPTLQPWSLPTMNTFNQANFAANPVREHAHDPFLVPPPPPYASSYASLLNRRVPSLQFAYDGSSSDHLRIISDALGPVIQPGSAPFGLEAELSKIAAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVILHVKELKHQTSLIAETSPVPTELDELIVDAADEDGKFVIKASLCCEDRTDLLPDLIKTLKTLRLRTLKAEITTLGGRVKNVLFITGEDDPFSNNNDGEKSQKQYCISSIQEALKAVMEKASGDESSSGCVKRQRTANVNVIEHRSS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00585 357 Gene3D - 162 226 IPR036638 GO:0046983
Pte10g00585 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 172 223 IPR036638 GO:0046983
Pte10g00585 357 MobiDBLite consensus disorder prediction 1 52 - -
Pte10g00585 357 PANTHER TRANSCRIPTION FACTOR BHLH30 19 349 IPR045847 GO:0003700|GO:0006355
Pte10g00585 357 MobiDBLite consensus disorder prediction 14 48 - -
Pte10g00585 357 Pfam Helix-loop-helix DNA-binding domain 171 217 IPR011598 GO:0046983
Pte10g00585 357 FunFam transcription factor bHLH30 163 226 - -
Pte10g00585 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 217 IPR011598 GO:0046983
Pte10g00585 357 SMART finulus 174 223 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00585 Pte-Chr10 5386890 5389199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00585 1 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 54.642 8.41e-102 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte10g00585 HLH 9.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00585 - - cave:132184452 462.996