Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00583 ATGGCCACTGTTGCAGCAAGAGGAGTCGGGGTAGGAGTGACAAAGCTCCACCCTCAAAATCCCATGAACACAACTCTATTCCTTGGTCAGAAACTGAAAATAAAACCCCCAGAGTTTCAGACAAGTAAAAGGGTAAACCTTTCAAGCTCGAGATCATTTGTAGTTTATGCGTTCGCAGGTGGTGAATGGTTAGACTCCATTCACAACCTCTTTGTAGGAGTTGGAGTTGGGCTTCCATGCACAGTCATGGAGTGTGGTGATATTATTTATAGGAGTACTCTTCCCAAGTCCAATGGTTTGACCATTACAACCCCTGGTGCAATTCTGGCTTTGGGTGCTCTGTCTTATCTATGGGCGACGCCTGGTGTAGCTCCTGGCTTCTTTGACATGTTTTTTCTAGCTTTTGTTGAAAGACTCTTTAGACCCACGTACAAAAAGGATGATTTTGTTTTAGGGAAGAAATTAGGGGAGGGGTCCTTTGGAGTAGTCTATAGAGTTTCACTCGCCAAGAAACCTTCTTCAAAGAAGGAGGGCGACTTAGTCTTGAAAAAGGCAACCGACTATGGGGCAGTTGAAATTTGGATGAATGAGAGAGTGCGAAGAGCTTGTGCAAGCAGCTGTGCTGATTTTATTTATGGTTTTCTTGAGAGTTCCTCAAAGACAGGTGCTGAGTATTGGCTCATATGGCGGTTTGAAGGGGAGGCTACTCTAGCAGATTTAATACAGAGTAAAGATTTCCCCTATAATGTTGAGACAATAATTCTGGGCCAGGTCCAAGACTTGCCAAAGGGTTTGGAAAGAGAAAATAGAATTATTCAAACAATAATGAGGCAGCTCTTATTTGCACTTGATGGCCTTCATTCGACAGGGATTGTGCACAGGGATGTGAAACCTCAGAATATTATTTTCTCTGAGGGTTCACGTACATTCAAGATCATTGATCTTGGTGCCGCAACTGACCTGCGAGTTGGAATAAACTATGTTCCTAAGGAATTTCTTTTGGATCCAAGGTATGCTGCACCAGAACAGTACATCATGAGCACACAAACGCCATCTGCACCTTCTGCTCCTGTTGCTGCTGCACTTTCGCCAGTTCTATGGCAGTTGAATTTACCAGACAGGTTTGACATCTACAGCACTGGTTTGATTTTTCTACAAATGGCATTTCCCTCCTTAAGGACAGATAGTGGTCTCATACAGTTCAACCGTCAGTTGAAGAGGTGCGACTATGACTTAGTTGCTTGGAGGAAAGTCGTGGAGGCCCGAGCCAGCCCTGATCTCAGGAGGGGCTTTCAGTTGTTGGATTTAGATGGTGGTATTGGATGGGAGCTCCTGACATCCATGGTTCGATACAAAGCAAGACAAAGAATAAGTGCAAAAGCAGCTCTAGCCCATCCTTACTTTGATAGGGAAGGTCTGCTGGCATTGTCCTTCATGCAAAATTTAAGACTGCAATTCTTTCGAGCAACACAGCAGGACTACAGTGAAGCTGCAAAGTGGATCATTCAGCTTATGGCAAAATCTGGAACAGAGAAGGAAGGTGGATTTACTGAGGCCCAATTGCAGGAATTGAGGGAAATTGAACCTAGGAAGGCTGGTGCAAAGAGAAAAGCTCTTGCTTCAGCTCTAAGACTTCAGAGGAAAATCATAAAAACATGGAATGAAAGCATGGATGAGCTCAATAGACGAAGGAGAAGTCTTTGGTGGAGCAGATGGATCCCAAGAGAGGAATGA 1734 0.4429 MATVAARGVGVGVTKLHPQNPMNTTLFLGQKLKIKPPEFQTSKRVNLSSSRSFVVYAFAGGEWLDSIHNLFVGVGVGLPCTVMECGDIIYRSTLPKSNGLTITTPGAILALGALSYLWATPGVAPGFFDMFFLAFVERLFRPTYKKDDFVLGKKLGEGSFGVVYRVSLAKKPSSKKEGDLVLKKATDYGAVEIWMNERVRRACASSCADFIYGFLESSSKTGAEYWLIWRFEGEATLADLIQSKDFPYNVETIILGQVQDLPKGLERENRIIQTIMRQLLFALDGLHSTGIVHRDVKPQNIIFSEGSRTFKIIDLGAATDLRVGINYVPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVAAALSPVLWQLNLPDRFDIYSTGLIFLQMAFPSLRTDSGLIQFNRQLKRCDYDLVAWRKVVEARASPDLRRGFQLLDLDGGIGWELLTSMVRYKARQRISAKAALAHPYFDREGLLALSFMQNLRLQFFRATQQDYSEAAKWIIQLMAKSGTEKEGGFTEAQLQELREIEPRKAGAKRKALASALRLQRKIIKTWNESMDELNRRRRSLWWSRWIPREE* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00583 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Pte10g00583 577 Gene3D Phosphorylase Kinase; domain 1 135 230 - -
Pte10g00583 577 ProSiteProfiles Protein kinase domain profile. 149 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00583 577 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 62 551 - -
Pte10g00583 577 CDD STKc_SNT7_plant 153 468 - -
Pte10g00583 577 Pfam Protein kinase domain 150 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00583 577 SMART serkin_6 149 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte10g00583 577 SUPERFAMILY Protein kinase-like (PK-like) 134 470 IPR011009 -
Pte10g00583 577 FunFam Serine/threonine-protein kinase STN7, chloroplastic 259 473 - -
Pte10g00583 577 ProSitePatterns Protein kinases ATP-binding region signature. 155 183 IPR017441 GO:0005524
Pte10g00583 577 Gene3D Transferase(Phosphotransferase) domain 1 258 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00583 Pte-Chr10 5343170 5347427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00583 268 469 Core Cell Cycle Gene Families AT2G38620 31.163 9.04e-17 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Pte10g00583 Pkinase 7.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00583 - - qsa:O6P43_032791 960.288